Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 540 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  211 bits (536), Expect = 7e-59
 Identities = 176/555 (31%), Positives = 281/555 (50%), Gaps = 39/555 (7%)

Query: 5   LTVGGRLALGFGIFSLILTAAVLVALQALARVN---EQVEKMAAKDWQKVEMAKDIAYAA 61
           L++  R  + FG+ +L++    L AL+ +A V    +  E ++    + +   +D   + 
Sbjct: 6   LSIAKRALISFGLIALLVLLQGLFALKQVAEVRSTGQHTENVSLPSTRYLGEIRDYILSI 65

Query: 62  NDVARTVFSLFHDTSRLAEQKQKIVGYRDMVNQRLDILEKLLYRPKGK--QLVADL-KTK 118
                 V SL     R+A  ++  V   D    RL  +E  L +   +   LV D  + +
Sbjct: 66  R-----VLSL-----RMALNREPKV--LDATIARLHQVEGWLEQTLTRFAPLVDDYNRVQ 113

Query: 119 RLAFAGTYPKVLELLEAGRREEASRLFASEGMPQL------EAYVQAVDAFVAFQGELFE 172
              F  T     + L+  + EE SR   SE M  L      +   Q  D F         
Sbjct: 114 YETFVSTVKSYRQALD--QYEELSRQNRSEDMSALLNGKIQDYSTQTGDQFTELMNLTAS 171

Query: 173 E---SAVTAREVYAQARNLMLVFLAAAIVLATALALWIIRSVTRPLGGEPEEAKALVQRL 229
           E   SA  A  +YAQ +  ++  L A  +L + LA  +IRS+  P+     +A  + +++
Sbjct: 172 EVSQSASHADGLYAQVKMTVIGALIAVALLTSCLAWLLIRSIVMPI----RQAVRVAEQV 227

Query: 230 AEGDLSADLRLHPQDRGDSLMAALATMRNSLRAMVGEIQGNAGEVSEAARDLSVNSVQLA 289
           A+GDLSA ++    D    L+ ALA+M+NSLR  +  I   + +++ AA+ +S N+   +
Sbjct: 228 ADGDLSAPIQSQGPDETARLLRALASMQNSLRDTLQLISDTSNQLNGAAQQMSQNTGLDS 287

Query: 290 QSSATQSEATAAMAAAVEQVTVSIAQVSDSASHTHAISDSTGQLSGD---GHDVILRTVA 346
                Q       A AV ++TV++ +V+ +A  T   SD+T Q + +   G   ++ T+ 
Sbjct: 288 NRLQQQHNEIEQAATAVNEMTVAVEEVARNAVST---SDTTRQSTIEATQGQARVIETLD 344

Query: 347 EMQAVAVAVGGAARSIEAMGSRSEQISSVVQVIRMVAEQTNLLALNAAIEAARAGEAGRG 406
            +QA++  VG A + ++ +  +S +I  V+ VIR +AEQTNLLALNAAIEAARAGEAGRG
Sbjct: 345 SIQAMSAEVGTALQQVQTLAEQSREIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRG 404

Query: 407 FAVVADEVRKLAERTALATTEISDMIAGVQDAAREAVDAMGGATARVEQGVAMAEQASDS 466
           FAVVADEVR LA RT  +T EI  MIA VQ      V +M G + RV Q +++AEQA  +
Sbjct: 405 FAVVADEVRALAHRTQQSTREIEQMIARVQGDTDSVVLSMHGNSQRVAQTLSIAEQAGVA 464

Query: 467 MQAIRSSSQEVVAAVNTIADALREQKHAGGDISANVEKVAQMVEENSAATHEAADTARRL 526
           +  I  + +++      IA A  EQ     ++  N+  +  +   ++ A+ + + T+R L
Sbjct: 465 LTQITCAMEQIHERNLVIASASEEQAQVAREVDRNLLNIRDLSLASADASTQTSATSREL 524

Query: 527 EALAQALHQTLRRFR 541
             LA  L   + RFR
Sbjct: 525 SQLAAGLQNLVVRFR 539