Pairwise Alignments

Query, 547 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

Subject, 554 a.a., HAMP domain-containing protein from Rahnella sp. WP5

 Score =  228 bits (580), Expect = 6e-64
 Identities = 154/550 (28%), Positives = 270/550 (49%), Gaps = 35/550 (6%)

Query: 1   MARKLTVGGRLALGFGIFSLILTAAVLVALQALARVNEQVEKMAAKDWQKVEMAKDIAYA 60
           +   + VG RL   F +  L+L     +A+  ++ +N  +E++ +  + KV +A D+   
Sbjct: 4   LINNMRVGARLGAAFSLVILLLVIVSGIAITKISSINTSIEQIISDRYVKVRLAFDVRDG 63

Query: 61  ANDVARTVFSLFHDTSRLAEQKQKIVGYRDMV---NQRLDILEKLLYRPKGKQLVADLKT 117
            ND  + +  +  DT    + K++ +   D V   N  +D +  +     GKQ +  L+ 
Sbjct: 64  VNDQIKYLRGIVIDTKNPEQNKKRYLQLDDTVKKTNLAMDKIAAIQSTVTGKQKIKTLQE 123

Query: 118 KRLAFAGTYPKVLELLEAGRREEASRLFASEGMPQLEAYVQAVDAFVAFQGELFEESAVT 177
               F     +++ L  AG  + A+     +      AY+    AF   Q +  +    T
Sbjct: 124 AGETFETAKEQLIALARAGDMDGATEFVLRKLTTSQNAYLDLATAFANSQDQQLQAEGKT 183

Query: 178 AREVYAQARNLMLVFLAAAIVLATALALWIIRSVTRPLGGEPEEAKALVQRLAEGDLSAD 237
           A    A A  L L+F A AI++A AL  ++ RS+TRPL      A  + + +A GDL+  
Sbjct: 184 AIADGATAIQLTLIFSALAILMAAALGYFLTRSITRPL----HTAVKVAENVAAGDLTTQ 239

Query: 238 LRLHPQDRGDSLMAALATMRNSLRAMVGEIQGNAGEVSEAARDLSVNSVQLAQSSATQSE 297
           +++  QD    LM  L  M  +L  +V E++     ++ A+ +++  ++ L+  +  Q+ 
Sbjct: 240 IQVMSQDETGQLMQGLKNMNENLLKIVTEVRAGTNAITSASSEIAAGNLDLSSRTEQQAS 299

Query: 298 ATAAMAAAVEQVTVSIAQVSDSASHTHAISDSTGQLSGDGHDVILRTVAEMQAVAVAVGG 357
           +    A+A+EQ+T ++ Q +D+A   + ++    +++  G +V              VG 
Sbjct: 300 SLEETASAMEQMTATVKQNADNARQANLLAAQASRVAVQGGEV--------------VGE 345

Query: 358 AARSIEAMGSRSEQISSVVQVIRMVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRKL 417
              ++E + + S +I  ++ VI  +A QTN+LALNAA+EAARAGE GRGFAVVA EVR L
Sbjct: 346 VVNTMEGINTSSRKIVDIIAVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNL 405

Query: 418 AERTALATTEISDMIAGVQDAAREAVDAMGGATARVEQGVAMAEQASDSMQAIRSSSQEV 477
           A+R+A A  EI  +I                + A+V+ G  +  +A  +M  + SS + V
Sbjct: 406 AQRSASAAKEIKVLI--------------DDSVAKVDNGTQLVAKAGATMAEVVSSVKNV 451

Query: 478 VAAVNTIADALREQKHAGGDISANVEKVAQMVEENSAATHEAADTARRLEALAQALHQTL 537
              V  IA A  EQ     +I+  + ++ ++ ++N+A   EA+  A  L   A+ L Q +
Sbjct: 452 TDIVGEIAIASNEQSTGIEEINKAITQMDEVTQQNAALVQEASSAAYSLNEQAERLSQAI 511

Query: 538 RRFRLEAHSA 547
             F++ A SA
Sbjct: 512 SIFKVSAGSA 521