Pairwise Alignments

Query, 263 a.a., Transcriptional regulatory protein (probably AraC-family) from Mycobacterium tuberculosis H37Rv

Subject, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  131 bits (330), Expect = 1e-35
 Identities = 84/228 (36%), Positives = 117/228 (51%), Gaps = 9/228 (3%)

Query: 24  RHRHPSHQIVYPSAGAVSVTTHAGTWITPVNRAIWIPAGCWHQHKFHGHTQFHGVALDPQ 83
           RH HP  Q+ Y  +G + V T  G ++ P  RAI IP G  H+      T+   + +D +
Sbjct: 39  RHNHPWAQLSYAISGVLRVHTERGRFLAPPQRAILIPPGLLHEVISSPQTEMRSLYIDQR 98

Query: 84  RYRGGPATPTVLAVNPLMRELV--IACSQADRTDTDEHHRMLAVLQDQL---PTTSIREP 138
                PA   VLAV+PL+REL+        D  +     R+ AV+ DQL   P  S    
Sbjct: 99  VVPWAPAHCQVLAVSPLLRELIRTFGTLPVDYDEQGADGRLAAVILDQLRAAPELSYS-- 156

Query: 139 LWVPSPTDRRLRHACALIADNLTQPLTLQQIGGRIGVSQRTLSRLFSDELGMTFPQWRTQ 198
             +P P D RLR  C  + +     L+L Q   R+ +S++TL+R F  + G++F  WR +
Sbjct: 157 --LPWPDDARLRGICEALYEQPDLSLSLAQWSERLHISEKTLTRQFQRDTGLSFRAWRQR 214

Query: 199 LRLQHALVLLAERHDVTSVASECGWATPSAFIDTYRQAFGHTPGQAAK 246
           LRL  AL LL     VT VA  CG+ + SAFI  + Q FG TPG  A+
Sbjct: 215 LRLLSALPLLERGQPVTDVALACGYESTSAFIAAFGQQFGTTPGALAR 262