Pairwise Alignments

Query, 266 a.a., Probable dipeptide-transport integral membrane protein ABC transporter DppC from Mycobacterium tuberculosis H37Rv

Subject, 296 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  166 bits (421), Expect = 4e-46
 Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 4/261 (1%)

Query: 1   VIAAALILLILVV--AAFPSLFTAADPTYADPSQSMLAPSAAHWFGTDLQGHDIYSRTVY 58
           +IA A I L LVV  A F       DP    P+  +  PSA    GTD  G D+ SR +Y
Sbjct: 29  IIAVATICLTLVVLMAIFAPWLAPHDPVKLAPALRLKPPSAEFLLGTDAYGRDLLSRIIY 88

Query: 59  GARASVTVGLGATLAVFVVGGALGALAGFYGSWIDAVVSRVTDVFLGLPLLLAAIVLMQV 118
           G R S+ +G+G+ +    +G  +G +AGF+  W+DAV+ RV D  + +P +L AI ++  
Sbjct: 89  GGRVSLLIGIGSAIVAIAIGLVIGLVAGFF-RWVDAVMMRVMDGLMAIPSVLLAIAVVS- 146

Query: 119 MHHRTVWTVIAILALFGWPQVARIARGAVLEVRASDYVLAAKALGLNRFQILLRHALPNA 178
           +   ++ TV+  + +   P+VAR+ R  VL  R   YV AA ++G +  +I++RH +PN 
Sbjct: 147 LSGASLTTVLIAITIPEIPRVARLVRSVVLTAREEPYVEAAISVGSSLPKIMVRHLMPNT 206

Query: 179 VGPVIAVATVALGIFIVTEATLSYLGVGLPTSVVSWGGDINVAQTRLRSGSPILFYPAGA 238
           V P+I   T      I+TEA LS+LG G+     +WG  +   +   +    ++F+P   
Sbjct: 207 VAPLIVQGTYIAASAILTEAILSFLGAGISPETPTWGNIMAEGRAYFQIKPMLIFWPGLL 266

Query: 239 LAITVLAFMMMGDALRDALDP 259
           L+I +L+  ++GDA RDALDP
Sbjct: 267 LSIAILSVNLIGDAARDALDP 287