Pairwise Alignments

Query, 212 a.a., Probable alternative RNA polymerase sigma-D factor SigD from Mycobacterium tuberculosis H37Rv

Subject, 165 a.a., RNA polymerase sigma factor, sigma-70 family from Dechlorosoma suillum PS

 Score = 51.6 bits (122), Expect = 8e-12
 Identities = 44/132 (33%), Positives = 64/132 (48%), Gaps = 4/132 (3%)

Query: 73  ADDVAQEVCLATITALPRYRDRGRPFLAFLYGIAAHKVADAHRA-AGRDRAY-PAETLPE 130
           A ++AQE  L  +  L   +D  R   AFLY IAA+   D +RA AGR R   P E   E
Sbjct: 32  ARELAQETFLRMM--LSDGKDAIRNPRAFLYRIAANLAVDHYRAEAGRPREILPLEDCAE 89

Query: 131 RWSADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAV 190
           +     GPEQ+A    ++ R+   +E LP + RE+ +     G    + A   G +  A+
Sbjct: 90  QACPRPGPEQVASARQTLARLAAAVEQLPPRCREVFLRHKFDGCRQADLAREYGISVNAI 149

Query: 191 RVAQHRALQRLK 202
                RAL +L+
Sbjct: 150 EKHLIRALVQLR 161