Pairwise Alignments

Query, 183 a.a., Conserved protein from Mycobacterium tuberculosis H37Rv

Subject, 245 a.a., pentapeptide repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 62.8 bits (151), Expect = 5e-15
 Identities = 46/147 (31%), Positives = 61/147 (41%), Gaps = 5/147 (3%)

Query: 6   DCEFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAES-----QHRGSAFRNCTFERTTLW 60
           DC+  G +    DL   +   A+F   +  G +L ++     Q  G+  R   F+RT   
Sbjct: 81  DCDLAGAELAGADLRDAYLTYAVFDGANLEGADLRDAFMPFAQFSGARMRGILFDRTNAR 140

Query: 61  HSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLR 120
            + FA   +  +  V   L   TL + D   A L G  L G N    RL    L + DL 
Sbjct: 141 DTVFAGADLRAASMVGVALPRATLTEADLGGADLSGAFLEGANFGNARLVGAVLREADLT 200

Query: 121 KCVLRGADLSGARTTGARLDDADLRGA 147
              L GADLS A  TGA    A   GA
Sbjct: 201 GARLTGADLSEADLTGAVTQAAGFSGA 227



 Score = 60.1 bits (144), Expect = 3e-14
 Identities = 47/150 (31%), Positives = 64/150 (42%), Gaps = 8/150 (5%)

Query: 31  ECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFT 90
           +CD +G  LA +  R +      F+   L  +      M  + F   R+R +  D  +  
Sbjct: 81  DCDLAGAELAGADLRDAYLTYAVFDGANLEGADLRDAFMPFAQFSGARMRGILFDRTNAR 140

Query: 91  LAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGA-----RTTGARLDDADLR 145
             V  G DLR  ++ G  L   +L + DL    L GA L GA     R  GA L +ADL 
Sbjct: 141 DTVFAGADLRAASMVGVALPRATLTEADLGGADLSGAFLEGANFGNARLVGAVLREADLT 200

Query: 146 GATVDPVLWRTASLVGARVDVDQAVAFAAA 175
           GA +       A L GA   V QA  F+ A
Sbjct: 201 GARLTGADLSEADLTGA---VTQAAGFSGA 227



 Score = 43.1 bits (100), Expect = 4e-09
 Identities = 33/113 (29%), Positives = 44/113 (38%)

Query: 50  RNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRL 109
           R+C      L  +      +  +VF    L    L D     A   G  +RG+       
Sbjct: 80  RDCDLAGAELAGADLRDAYLTYAVFDGANLEGADLRDAFMPFAQFSGARMRGILFDRTNA 139

Query: 110 RETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGA 162
           R+T     DLR   + G  L  A  T A L  ADL GA ++   +  A LVGA
Sbjct: 140 RDTVFAGADLRAASMVGVALPRATLTEADLGGADLSGAFLEGANFGNARLVGA 192



 Score = 39.7 bits (91), Expect = 4e-08
 Identities = 28/82 (34%), Positives = 36/82 (43%)

Query: 73  VFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSLVDTDLRKCVLRGADLSGA 132
           V +AC   P T  D D   A+L  N  R  +L G  L    L D  L   V  GA+L GA
Sbjct: 53  VALACLALPATGADRDSVNALLADNQCRDCDLAGAELAGADLRDAYLTYAVFDGANLEGA 112

Query: 133 RTTGARLDDADLRGATVDPVLW 154
               A +  A   GA +  +L+
Sbjct: 113 DLRDAFMPFAQFSGARMRGILF 134



 Score = 24.6 bits (52), Expect = 0.001
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 11/69 (15%)

Query: 114 LVDTDLRKCVLRGADLSGARTTGARLDDADLRGATVDPVLWRTASLVGARVDVDQAVAFA 173
           L D   R C L GA+L+           ADLR A +   ++  A+L GA +  D  + FA
Sbjct: 74  LADNQCRDCDLAGAELA----------GADLRDAYLTYAVFDGANLEGADLR-DAFMPFA 122

Query: 174 AAHGLCLAG 182
              G  + G
Sbjct: 123 QFSGARMRG 131