Pairwise Alignments

Query, 183 a.a., Conserved protein from Mycobacterium tuberculosis H37Rv

Subject, 220 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.1 bits (126), Expect = 3e-12
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 15/136 (11%)

Query: 29  FSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVD 88
           FSEC F    LA+ +       N +F  ++L+   F  C +LG+      +  + L D +
Sbjct: 67  FSECKFRSSQLADIRFENCDLSNISFAESSLYRVEFIACKLLGTNLSETTMNHVLLHDCN 126

Query: 89  FTLAVLGGNDLRGLNLTGCRLRETS---------------LVDTDLRKCVLRGADLSGAR 133
            +   L  + +  +  + C  R  S               LV+ D     LRG DL  +R
Sbjct: 127 ASYINLAMSKMNQVRFSHCHFRNGSFNDCRFSSVAFDSCDLVEADFSHAPLRGIDLRTSR 186

Query: 134 TTGARLDDADLRGATV 149
             G  L+ +DL+GA +
Sbjct: 187 IGGITLNISDLKGAVI 202



 Score = 36.2 bits (82), Expect = 4e-07
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 10/107 (9%)

Query: 8   EFTGRDFRDEDLSRLHTERAMFSECDFSGVNLAESQHRGSAFRNCTFERTTLWHSTFAQC 67
           EF        +LS       +  +C+ S +NLA S+     F +C F      + +F  C
Sbjct: 101 EFIACKLLGTNLSETTMNHVLLHDCNASYINLAMSKMNQVRFSHCHFR-----NGSFNDC 155

Query: 68  SMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGCRLRETSL 114
                 F +C      L + DF+ A L G DLR   + G  L  + L
Sbjct: 156 RFSSVAFDSC-----DLVEADFSHAPLRGIDLRTSRIGGITLNISDL 197



 Score = 33.9 bits (76), Expect = 2e-06
 Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 5/101 (4%)

Query: 48  AFRNCTFERTTLWHSTFAQCSMLGSVFVACRLRPLTLDDVDFTLAVLGGNDLRGLNLTGC 107
           +F+NCTF      + TF++C    S     R     L ++ F  + L   +     L G 
Sbjct: 56  SFKNCTFR-----NQTFSECKFRSSQLADIRFENCDLSNISFAESSLYRVEFIACKLLGT 110

Query: 108 RLRETSLVDTDLRKCVLRGADLSGARTTGARLDDADLRGAT 148
            L ET++    L  C     +L+ ++    R      R  +
Sbjct: 111 NLSETTMNHVLLHDCNASYINLAMSKMNQVRFSHCHFRNGS 151