Pairwise Alignments

Query, 949 a.a., Probable preprotein translocase SecA1 1 subunit from Mycobacterium tuberculosis H37Rv

Subject, 948 a.a., preprotein translocase subunit SecA from Synechococcus elongatus PCC 7942

 Score =  552 bits (1422), Expect = e-161
 Identities = 293/538 (54%), Positives = 385/538 (71%), Gaps = 18/538 (3%)

Query: 1   VLSKLLRLGEGRMVKRLKKVADYVGTLSDDVEKLTDAELRAKTDEFKRRL-----ADQKN 55
           +L+ LL     R VK+ K +   +  L +D+E L+D +L AKT EF+++L     +    
Sbjct: 1   MLNLLLGDPNVRKVKKYKPLVTEINLLEEDIEPLSDKDLIAKTAEFRQKLDKVSHSPAAE 60

Query: 56  PETLDDLLPEAFAVAREAAWRVLDQRPFDVQVMGAAALHLGNVAEMKTGEGKTLTCVLPA 115
            E L +LLPEAFAV REA+ RVL  R FDVQ++G   LH G +AEMKTGEGKTL   LP+
Sbjct: 61  KELLAELLPEAFAVMREASKRVLGLRHFDVQMIGGMILHDGQIAEMKTGEGKTLVATLPS 120

Query: 116 YLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGLQVGVILATMTPDERRVAYNADITY 175
           YLNAL+G G H+VTVNDYLA+RD+EWMG+VHRFLGL VG+I   M+P+ERR  YN DITY
Sbjct: 121 YLNALSGKGAHVVTVNDYLARRDAEWMGQVHRFLGLSVGLIQQGMSPEERRRNYNCDITY 180

Query: 176 GTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSILIDEARTPLIISGPADGASNWY 235
            TN+E GFDYLRDNMA  ++++VQR  +YA++DEVDSILIDEARTPLIISG  D  S  Y
Sbjct: 181 ATNSELGFDYLRDNMAAVIEEVVQRPFNYAVIDEVDSILIDEARTPLIISGQVDRPSEKY 240

Query: 236 TEFARLAPLM----------EKDVHYEVDLRKRTVGVHEKGVEFVEDQLGIDNLYEAANS 285
              + +A L+          E D  YEVD + R V + ++G    E  LG+ +L++ +N 
Sbjct: 241 MRASEVAALLQRSTNTDSEEEPDGDYEVDEKGRNVLLTDQGFINAEQLLGVSDLFD-SND 299

Query: 286 PLVSYLNNALKAKELFSRDKDYIVRDGEVLIVDEFTGRVLIGRRYNEGMHQAIEAKEHVE 345
           P   Y+ NA+KAKELF +D +YIVR GE++IVDEFTGRV+ GRR+++G+HQA+E+KE VE
Sbjct: 300 PWAHYIFNAIKAKELFIKDVNYIVRGGEIVIVDEFTGRVMPGRRWSDGLHQAVESKEGVE 359

Query: 346 IKAENQTLATITLQNYFRLYDKLAGMTGTAQTEAAELHEIYKLGVVSIPTNMPMIREDQS 405
           I+ E QTLA+IT QN+F LY KL+GMTGTA+TE  E  + YKL V  +PTN    R DQ 
Sbjct: 360 IQPETQTLASITYQNFFLLYPKLSGMTGTAKTEELEFEKTYKLEVTVVPTNRVSRRRDQP 419

Query: 406 DLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYH 465
           D++YKTE  K+ A+  D AE +A+G+PVL+GTTSVE+SE+LS+   ++ IPHN+LNAK  
Sbjct: 420 DVVYKTEIGKWRAIAADCAELHAEGRPVLVGTTSVEKSEFLSQLLNEQGIPHNLLNAKPE 479

Query: 466 --EQEATIIAVAGRRGGVTVATNMAGRGTDIVLGGNVDFLTDQRLRERGLDPVETPEE 521
             E+EA I+A AGRRG VT++TNMAGRGTDI+LGGN D++   +LRE  +  + + EE
Sbjct: 480 NVEREAEIVAQAGRRGAVTISTNMAGRGTDIILGGNADYMARLKLREYWMPQLVSFEE 537



 Score =  247 bits (630), Expect = 3e-69
 Identities = 141/344 (40%), Positives = 203/344 (59%), Gaps = 27/344 (7%)

Query: 506 QRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERHESRRIDN 565
           Q+LRE      +  +EYEA              +E  EV+E GGL+V+GTERHESRR+DN
Sbjct: 629 QKLREAYQ---QVRKEYEAV-----------TKQEQAEVVELGGLHVIGTERHESRRVDN 674

Query: 566 QLRGRSGRQGDPGESRFYLSLGDELMRRFNGAALETLLTRLNLPDDVPIEAKMVTRAIKS 625
           QLRGR+GRQGDPG +RF+LSL D L+R F G  +  L+    + +D+PIE+ M+TR+++ 
Sbjct: 675 QLRGRAGRQGDPGSTRFFLSLEDNLLRIFGGDRVAKLMNAFRVEEDMPIESGMLTRSLEG 734

Query: 626 AQTQVEQQNFEVRKNVLKYDEVMNQQRKVIYAERRRILEGENLKDQALDMVRDVITAYVD 685
           AQ +VE   +++RK V +YDEVMN QR+ IYAERRR+LEG  LK+Q +      +   VD
Sbjct: 735 AQKKVETYYYDIRKQVFEYDEVMNNQRRAIYAERRRVLEGRELKEQVIQYGERTMDEIVD 794

Query: 686 GATGEGY-AEDWDLDALWTALKTLYPVGITADSLTRKDHEFERDDLTREELLEALLKDAE 744
                   +E+WDL+ L   +K         + L  K    + +DL+ E +   L +   
Sbjct: 795 AHINVDLPSEEWDLEKLVNKVKQFV---YLLEDLEAK----QLEDLSPEAIKIFLHEQLR 847

Query: 745 RAYAAREAELEEIAGEGAMRQLERNVLLNVIDRKWREHLYEMDYLKEGIGLRAMAQRDPL 804
            AY  +EA++++I   G MRQ ER  +L  ID  WREHL  M+ L+E +GLR   Q+DPL
Sbjct: 848 IAYDLKEAQIDQIQ-PGLMRQAERYFILQQIDTLWREHLQAMEALRESVGLRGYGQKDPL 906

Query: 805 VEYQREGYDMFMAMLDGMKEESVGFLFNVTVEAVPAPPVAPAAE 848
           +EY+ EGY++F+ M+  ++   +  +F       P P   P AE
Sbjct: 907 LEYKSEGYELFLEMMTAIRRNVIYSMFMFD----PQPQARPQAE 946