Pairwise Alignments

Query, 378 a.a., Probable peptide chain release factor 2 PrfB (RF-2) from Mycobacterium tuberculosis H37Rv

Subject, 352 a.a., peptide chain release factor 2 (RefSeq) from Shewanella sp. ANA-3

 Score =  271 bits (693), Expect = 2e-77
 Identities = 143/343 (41%), Positives = 208/343 (60%), Gaps = 5/343 (1%)

Query: 29  VLDVEGLRSRIEKLEHEASDPHLWDDQTRAQRVTSELSHTQGELRRVEELRRRLDDLPVL 88
           + D +    R+E++  E     +W++  RAQ +  E +  +  ++ ++++   L+D+  L
Sbjct: 11  IFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLEDVEGL 70

Query: 89  YELAAEEAGAAAADAVAEADAELKSLRADIEATEVRTLLSGEYDEREALVTIRSGAGGVD 148
            ELA EE      D   E   EL  L + +   E R + SG++D  +  + I+SG+GG +
Sbjct: 71  LELAIEEEDE---DTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGGTE 127

Query: 149 AADWAEMLMRMYIRWAEQHKYPVEVFDTSYAEEAGIKSATFAVHAPFAYGTLSVEQGTHR 208
           A DWA M++RMY+RW E H +  E+ + +  + AGIK AT      +A+G L  E G HR
Sbjct: 128 AQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHR 187

Query: 209 LVRISPFDNQSRRQTSFAEVEVLPVVETTDHIDIPEGDVRVDVYRSSGPGGQSVNTTDSA 268
           LVR SPFD+  RR TSF  V V P ++    IDI   D+R+DVYR+SG GGQ VN T+SA
Sbjct: 188 LVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTESA 247

Query: 269 VRLTHIPSGIVVTCQNEKSQLQNKIAAMRVLQAKLLERKRLEERAELDALK-ADGGSSWG 327
           VR+TH+P+  VV CQN++SQ +NK +AM+ L+AKL E +  ++ AE  A + A     WG
Sbjct: 248 VRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIGWG 307

Query: 328 NQMRSYVLHPYQMVKDLRTEYEVGNPAAVLDGDLDGFLEAGIR 370
           +Q+RSYVL     +KDLRT  E  N  AVLDGDLD F+EA ++
Sbjct: 308 SQIRSYVLDD-SRIKDLRTSVETRNTQAVLDGDLDKFIEASLK 349