Pairwise Alignments

Query, 900 a.a., Probable translation initiation factor if-2 InfB from Mycobacterium tuberculosis H37Rv

Subject, 940 a.a., translation initiation factor IF-2 from Bifidobacterium breve UCC2003

 Score =  922 bits (2383), Expect = 0.0
 Identities = 519/944 (54%), Positives = 644/944 (68%), Gaps = 56/944 (5%)

Query: 5   KARVHELAKELGVTSKEVLARLSEQGEFVKSASSTVEAPVARRLRESFGGSKPAPAKGTA 64
           K RV+ELAK+L V SK VL +L + GEFVKSASST+E PVARRL+ +F       AK  A
Sbjct: 3   KPRVYELAKDLNVDSKTVLEKLKDMGEFVKSASSTIEPPVARRLKAAFDKDDKGDAKPAA 62

Query: 65  KSPGKGPDKSLDKALDAAIDMAAGNGKAT----------AAPAKAA-----DSGGAAIVS 109
            +       +  K   AA    A    AT          AAPA A      D+GG     
Sbjct: 63  SAQKPAAKPAQHKPAAAATHQGAAPAAATPGPRPQAERPAAPAPARHNNQHDNGGR---- 118

Query: 110 PTTPAAPEP---------PTAVPPSPQAPHPGMAPGARP-------GPVPKPGIRTPRVG 153
           P+      P         P    P     + G   G+RP         +P+P  + PR G
Sbjct: 119 PSRQGQGRPNGNRQGQGRPNGGQPGQHQNNRGGQGGSRPTAGGNASNAIPRPHAQGPRPG 178

Query: 154 NNPFSSAQ----PADRPIPRP-PAPRPGTARPGVPRPGASPGSMPPRPGGAVGGARPPR- 207
           NNPFS  Q    P    IPRP P  RP T      RPG  PG    +  G   G RP + 
Sbjct: 179 NNPFSRKQGMHSPTPGDIPRPHPMARPTTEGGRGGRPGR-PGQGQGQGRGGFRGGRPGQG 237

Query: 208 -PGAPRPG----GRPGAPGAGRSDAGGGNYRGGGVGAAPGTGFRGRPGGG---GGGRPGQ 259
             G PRPG     RPG  GA +     G +RGG  G +   G  G P  G   GGGR G 
Sbjct: 238 GQGGPRPGQWGHNRPGQGGAAQGGGARGGFRGGQGGGSNFQG-GGAPSNGPARGGGRGG- 295

Query: 260 RGGAAGAFGRPGGAPRRGRKSKRQKRQEYDSMQAPVVGGVRLPHGNGETIRLARGASLSD 319
           RGG AGAFGR GG   + RK++  KR EY+ ++AP +GGVR+P+GNG+TIRL +GASL+D
Sbjct: 296 RGGTAGAFGRQGGKSSKARKNRLAKRHEYEELKAPTIGGVRIPNGNGQTIRLRQGASLAD 355

Query: 320 FADKIDANPAALVQALFNLGEMVTATQSVGDETLELLGSEMNYNVQVVSPEDEDRELLES 379
            A+KI+ N AALV  LF+LG+M TATQS+ +ET ++LG E+ +N+Q+VS E+ED+ELL+ 
Sbjct: 356 LAEKINVNQAALVTVLFHLGQMATATQSLDEETFQILGEEIGWNIQLVSAEEEDKELLQQ 415

Query: 380 FDLSYGEDE-GGEEDLQVRPPVVTVMGHVDHGKTRLLDTIRKANVREAEAGGITQHIGAY 438
           FD++  E+E   +EDL+ RPPVVTVMGHVDHGKTRLLDTIRK NV   EAGGITQ IGAY
Sbjct: 416 FDINLDEEELQDDEDLKPRPPVVTVMGHVDHGKTRLLDTIRKTNVIAREAGGITQRIGAY 475

Query: 439 QVAVDLDGSQRLITFIDTPGHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQ 498
           QV VDL+G  R ITF+DTPGHEAFTAMRARGA+ TD+AILVVAADDGVMPQTVEAINHAQ
Sbjct: 476 QVTVDLEGEPRKITFLDTPGHEAFTAMRARGAELTDVAILVVAADDGVMPQTVEAINHAQ 535

Query: 499 AADVPIVVAVNKIDKEGADPAKIRGQLTEYGLVPEEFGGDTMFVDISAKQGTNIEALEEA 558
           AA VPIVVAVNKID  GA+P K+RGQLTE+GLVPEE+GGDTMFVDISAKQGTN++ L EA
Sbjct: 536 AAKVPIVVAVNKIDVPGANPEKVRGQLTEFGLVPEEYGGDTMFVDISAKQGTNVDKLLEA 595

Query: 559 VLLTADAALDLRANPDMEAQGVAIEAHLDRGRGPVATVLVQRGTLRVGDSVVAGDAYGRV 618
           VLLTADA LDLRANPDM+A+G  +EA LD+GRG VATVLVQ GTL VGD++VAG +YGRV
Sbjct: 596 VLLTADAELDLRANPDMDARGATVEARLDKGRGAVATVLVQSGTLHVGDAIVAGTSYGRV 655

Query: 619 RRMVDEHGEDVEVALPSRPVQVIGFTSVPGAGDNFLVVDEDRIARQIADRRSARKRNALA 678
           R M+DE+G  ++ A PS PVQV+G TSVP AGD FLV  +DR ARQIA++R A +R A  
Sbjct: 656 RAMLDENGRAMDAAGPSTPVQVLGLTSVPTAGDLFLVASDDRAARQIAEKRQATERAAQL 715

Query: 679 ARSRKRISLEDLDS--ALKETSQLNLILKGDNAGTVEALEEALMGIQVDDEVVLRVIDRG 736
           A+ RK +SLED     A  E   LN+++KGD++G+VEALE++LM I+V DEV ++VI RG
Sbjct: 716 AKRRKVVSLEDFKKKFAESEIDMLNIVIKGDSSGSVEALEDSLMKIEVSDEVGIQVIHRG 775

Query: 737 VGGITETNVNLASASDAVIIGFNVRAEGKATELASREGVEIRYYSVIYQAIDEIEQALRG 796
           VG IT+ +VNLA+   AVIIGFNVR   +  +LA REGVEI+YYSVIY+AI++IE +L+G
Sbjct: 776 VGAITQNDVNLATVDKAVIIGFNVRPNRQVADLAEREGVEIKYYSVIYRAIEDIEASLKG 835

Query: 797 LLKPIYEENQLGRAEIRALFRSSKVGLIAGCLVTSGVMRRNAKARLLRDNIVVAENLSIA 856
           +LKP YEE     +EIR +FRSSK G IAG +V  G ++R  K R+LR+ +    +L I+
Sbjct: 836 MLKPEYEEVVTSHSEIREIFRSSKFGNIAGVMVQDGEVKRGTKCRILRNGVATVNDLEIS 895

Query: 857 SLRREKDDVTEVRDGFECGLTLG-YADIKEGDVIESYELVQKER 899
           SLRR KDDV  V++G+E G+ LG + DI+ GD+IE++E+ + ER
Sbjct: 896 SLRRFKDDVQSVKEGYEAGINLGTFNDIELGDIIETFEMQEVER 939