Pairwise Alignments

Query, 790 a.a., RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. from Mycobacterium tuberculosis H37Rv

Subject, 355 a.a., recombinase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  345 bits (885), Expect = 2e-99
 Identities = 169/250 (67%), Positives = 203/250 (81%)

Query: 5   PDREKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64
           P++EKAL   + QIEK +GKGS+M+LG++    +  I TGS++LDVALG GGLP GR++E
Sbjct: 5   PNKEKALAAVLGQIEKQFGKGSIMKLGEDRSMDVETISTGSLSLDVALGAGGLPMGRIVE 64

Query: 65  IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124
           IYGPESSGKTT+ L  +A AQ  G V AFIDAEHALDP YA+KLGVD D+LL SQPDTGE
Sbjct: 65  IYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGE 124

Query: 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184
           QALEI D L RSGA+D++++DSVAALVP+AE+EGE+GDSHVGL AR+MSQA+RK+ G L 
Sbjct: 125 QALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKLAGNLK 184

Query: 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244
            S T  IFINQ+R KIGVMFG+PETTTGG ALKFYASVR+D+RR   +K+G   VGN TR
Sbjct: 185 QSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGNETR 244

Query: 245 VKVVKNKCLA 254
           VKVVKNK  A
Sbjct: 245 VKVVKNKIAA 254



 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 44/82 (53%), Positives = 63/82 (76%)

Query: 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746
           VV +  + PF+QA+F ILYG+GI+R G L+D+GV   LI KSGAW++Y+G+++GQG+ NA
Sbjct: 247 VVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIGQGRANA 306

Query: 747 RNFLVENADVADEIEKKIKEKL 768
             FL EN ++A EIEK ++E L
Sbjct: 307 TKFLAENTEIAAEIEKTLREML 328