Pairwise Alignments

Query, 790 a.a., RecA protein (recombinase A) [contains: endonuclease PI-MTUI (MTU RecA intein)]. from Mycobacterium tuberculosis H37Rv

Subject, 355 a.a., recA protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  342 bits (876), Expect = 3e-98
 Identities = 167/247 (67%), Positives = 206/247 (83%), Gaps = 1/247 (0%)

Query: 6   DREKALELAVAQIEKSYGKGSVMRLG-DEARQPISVIPTGSIALDVALGIGGLPRGRVIE 64
           D++KAL+ A+AQIE+ +GKGS+M+LG D     I    TGSI LD+ALGIGG+P+GR+IE
Sbjct: 16  DKQKALDSALAQIERQFGKGSIMKLGADSPVAEIEATSTGSIGLDIALGIGGIPKGRIIE 75

Query: 65  IYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKKLGVDTDSLLVSQPDTGE 124
           IYGPESSGKTT+ LH +A  Q  GGV AF+DAEHALDP YA+KLGVD D LL+SQPDTGE
Sbjct: 76  IYGPESSGKTTLTLHCIAEEQKKGGVCAFVDAEHALDPQYARKLGVDLDELLISQPDTGE 135

Query: 125 QALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLMSQALRKMTGALN 184
           QALEI + L+RSGA+ +VV+DSVAAL P++ELEG+MGD+ VG QARLMSQA+RK+TGA++
Sbjct: 136 QALEITETLVRSGAVSMVVVDSVAALTPKSELEGDMGDAQVGAQARLMSQAMRKLTGAIS 195

Query: 185 NSGTTAIFINQLRDKIGVMFGSPETTTGGKALKFYASVRMDVRRVETLKDGTNAVGNRTR 244
            S  T IFINQ+R KIGVMFGSPETT+GG ALKFY+SVR+D+RR+ ++KD    VGN T+
Sbjct: 196 RSNCTVIFINQIRMKIGVMFGSPETTSGGNALKFYSSVRLDIRRIGSVKDRDEIVGNTTK 255

Query: 245 VKVVKNK 251
           VKVVKNK
Sbjct: 256 VKVVKNK 262



 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 45/90 (50%), Positives = 66/90 (73%)

Query: 687 VVVHNCSPPFKQAEFDILYGKGISREGSLIDMGVDQGLIRKSGAWFTYEGEQLGQGKENA 746
           VV +  +PPFKQ EFDI+YG+GIS+ G LID+GV  G+++KSG+WF+Y  E++GQG+ENA
Sbjct: 258 VVKNKVAPPFKQVEFDIIYGEGISKMGELIDLGVKAGVVQKSGSWFSYGDERIGQGRENA 317

Query: 747 RNFLVENADVADEIEKKIKEKLGIGAVVTD 776
           + +L +N   A E+E KI+   G+   + D
Sbjct: 318 KQYLRDNTRTALELEDKIRAAHGLDFQMPD 347