Pairwise Alignments

Query, 268 a.a., Possible DNA glycosylase from Mycobacterium tuberculosis H37Rv

Subject, 269 a.a., bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase from Rahnella sp. WP5

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 70/251 (27%), Positives = 105/251 (41%), Gaps = 18/251 (7%)

Query: 25  VSSPQGRFADSAS--ALNGRVLRRASAWGKHLFHHYVGGPVVHVHLGLYGTFTEWARPTD 82
           V +P+ R+  SA   AL+ + +       K+L      G ++ +HLG+ G+       T+
Sbjct: 28  VRNPRLRWPVSAEILALSDQPVLSVQRRAKYLLVELRTGWII-IHLGMSGSLRVLPEETE 86

Query: 83  GW------LPEPAGQVRMRMVGAEFGTDLRGPTVCESIDDGEVADVVARLGPDPLRSDAN 136
                   L    G V        FG  L    +  S       +V+A LGP+PL  D N
Sbjct: 87  AGKHDHVDLVMDTGHVLRYTDPRRFGAWLWSSDLAAS-------NVLAHLGPEPLSEDFN 139

Query: 137 PSSAWSRITKSRRPIGALLMDQTVIAGVGNVYRNELLFRHRIDPQRPGRGIGEPEFDAAW 196
               + +    + PI   LMD  ++ GVGN+Y +E LF   I P RP   +   E +   
Sbjct: 140 ADYLFEKSRTKKSPIKPWLMDNKLVVGVGNIYASESLFVAGISPDRPAHSLKRDETELLV 199

Query: 197 NDLVSLMKVGLRRGKIIVVRPEHDHGLPSYLPDRPRTYVYRRAGEPCRVCGGVIRTALLE 256
             + +++   + +G   +       G P Y        VY R GEPCR CG  I +    
Sbjct: 200 RTIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQ--ELQVYGRTGEPCRACGTPIESKKHA 257

Query: 257 GRNVFWCPVCQ 267
            R  F+CP CQ
Sbjct: 258 QRTTFFCPRCQ 268