Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 279 a.a., ABC transporter for N-Acetyl-D-glucosamine, permease protein 2 (from data) from Sinorhizobium meliloti 1021

 Score =  139 bits (350), Expect = 7e-38
 Identities = 86/273 (31%), Positives = 145/273 (53%), Gaps = 15/273 (5%)

Query: 11  AVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPT--LANYADIADAG--- 65
           AV+A L    +I L P  L ++ SF S +      PL +P P T  L  Y  +   G   
Sbjct: 13  AVHAALIAYTLIALFPVFLTIVNSFKSRNAIFR-EPLAVPTPETFSLIGYETVLKQGDFI 71

Query: 66  --FRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVAT-LMVPGTVTV 122
             F+ + +VT +  A++LL    F  +AA+A +  +FRG + L  +Y+A  +M+P  +  
Sbjct: 72  GYFQNSIIVTVVSIALVLL----FGAMAAFALSEYRFRG-NTLMGLYLALGIMIPIRLGT 126

Query: 123 VPLYLMMAQLGLRNTFWALVLPFMF-GSPYAIFLLREHFRLIPDDLINAARLDGANTLDV 181
           V +   M   GL NT  AL+L +   G P A+F+L E  R + DDL NA R+DG +   +
Sbjct: 127 VAILQGMVATGLVNTLTALILVYTAQGLPLAVFILSEFMRTVSDDLKNAGRIDGLSEYAI 186

Query: 182 IVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFNDQWTL 241
            + +V+P  RP +A +A+ T++  WN+  +PL++      + +T+ +     +F   W  
Sbjct: 187 FLRLVLPLIRPAMATVAVFTMIPIWNDLWFPLILAPAEATKTVTLGSQIFIGQFVTNWNA 246

Query: 242 VMAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274
           V++A ++AI P++ L+V F R ++  I    +K
Sbjct: 247 VLSALSLAIFPVLVLYVIFSRQLIRGITAGAVK 279