Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 299 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  142 bits (357), Expect = 1e-38
 Identities = 84/264 (31%), Positives = 141/264 (53%), Gaps = 6/264 (2%)

Query: 15  VLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPR-PPTLANYADIAD-AGFRRAAVV 72
           +L   A + ++PFL  L ++F+ +  F+      LPR P TL N+ D  D A + R    
Sbjct: 38  LLLCAAFLWMAPFLWMLSSAFSES-SFSPDMASLLPRFPLTLQNFRDAWDSADWLRLYAN 96

Query: 73  TALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQL 132
           T   +    L QL     A Y FA  +FRG+  LF++ +  LM+   + +VP  +++ Q 
Sbjct: 97  TLFFSFGTFLVQLVTITTAGYVFAYHEFRGKQTLFYLLLIQLMIMPVIMMVPNMMILKQF 156

Query: 133 GLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLDVIVHVVIPSSRP 192
           GL NT   +++P+ F S + +FL+R+ F  IP ++  AA ++G     V+  V+IP S P
Sbjct: 157 GLLNTLTGVMMPY-FASAFGVFLMRQAFLSIPREIEEAALMEGCRWWQVVFRVLIPMSWP 215

Query: 193 VLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATAD--LQSRFNDQWTLVMAATTVAI 250
            + A A +++   WN ++WPL++ +    +VLTV      + +    QW L+ A T +  
Sbjct: 216 AILAFATVSITYHWNEYLWPLMVLNDPDKQVLTVGLVSFAMGAESGGQWGLITAGTLMVC 275

Query: 251 VPLIALFVTFQRHIVASIVVSGLK 274
           +PL+  F+ FQ+  + S   SG+K
Sbjct: 276 LPLMLAFIIFQKQFLKSFGFSGIK 299