Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 282 a.a., sn-glycerol-3-phosphate ABC transporter permease UgpE from Rhodopseudomonas palustris CGA009

 Score =  133 bits (334), Expect = 5e-36
 Identities = 81/274 (29%), Positives = 134/274 (48%), Gaps = 11/274 (4%)

Query: 6   RVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYAD---IA 62
           +  N   + +L IG  I   P  L  + S       A G    LP    L  Y     + 
Sbjct: 6   KFGNLVPHLILWIGVAIVAFPVYLAFVASTQDNATIANGQMSLLPGSHFLETYYKTIFVG 65

Query: 63  DAGFRRAAVVTALMTAVIL-----LGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVP 117
            +G  R  V + L  + ++     LG++  S+++AYA    +F  R  +FW+   TLM+P
Sbjct: 66  SSGTTREPVASMLFNSFVMAMSIALGKIAISIISAYAIVYFRFPFRMTIFWIIFITLMLP 125

Query: 118 GTVTVVPLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGAN 177
             V + P Y + A L L +++  L LP +  S  A  L R+ F  +PD+L+ A+R+DGA 
Sbjct: 126 VEVRIYPTYKIAADLNLLDSYAGLALP-LIASATATLLFRQFFMTVPDELLEASRIDGAG 184

Query: 178 TLDVIVHVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADL--QSRF 235
            L      ++P SR  +AAL +I  +  WN ++WPL+IT+    + + +    +   S  
Sbjct: 185 PLRFFWDTLLPLSRTNMAALFVILFILGWNQYLWPLLITTRDDMQTIQIGIRKMIVTSDA 244

Query: 236 NDQWTLVMAATTVAIVPLIALFVTFQRHIVASIV 269
             +W +VMA   +A++P +A+ V  Q+  V  +V
Sbjct: 245 LTEWPIVMATAVLAMLPPVAVVVLMQKLFVRGLV 278