Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  159 bits (403), Expect = 5e-44
 Identities = 102/272 (37%), Positives = 150/272 (55%), Gaps = 9/272 (3%)

Query: 5   SRVSNTAVYAVLTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYADIADA 64
           +RV +TA    L   AV+   P L  + T+F   H     T   L  P TL N+    DA
Sbjct: 13  ARVLDTAAAWTL---AVLWALPLLYAVWTAF---HPSEFSTRFTLAAPLTLDNFRAAWDA 66

Query: 65  G-FRRAAVVTALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVV 123
             F R  V T L+  ++L GQL    LAAYAFA+  F G+  LF + +  LM+   V VV
Sbjct: 67  APFARYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVV 126

Query: 124 PLYLMMAQLGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLDVIV 183
             Y  M+ +G+ ++  A+ LP+M  S + IFLLR+ F+ IP +L  AA ++GA+TL ++ 
Sbjct: 127 ENYRTMSAIGVLDSTLAIGLPYM-ASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILW 185

Query: 184 HVVIPSSRPVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFND-QWTLV 242
            V +P  +PV  A A+++V   WNNF+WPL++T+    R LTV      S      W+++
Sbjct: 186 KVYVPLGKPVYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWSII 245

Query: 243 MAATTVAIVPLIALFVTFQRHIVASIVVSGLK 274
            AAT +   PL+  F+ FQR  V S + +G+K
Sbjct: 246 TAATLMTSGPLLIGFLLFQRQFVQSFMRAGIK 277