Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter UspB from Mycobacterium tuberculosis H37Rv

Subject, 284 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  143 bits (360), Expect = 5e-39
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 7/262 (2%)

Query: 16  LTIGAVITLSPFLLGLLTSFTSAHQFATGTPLQLPRPPTLANYADIADAGFRRAAVV--- 72
           L IG      P  L  + S  S  +        LP    + NY     AG      +   
Sbjct: 22  LIIGVAFIFFPIWLAFVASTVSQPEIVRPPMPLLPGDQLVENYTRALTAGINAPVALMLG 81

Query: 73  -TALMTAVILLGQLTFSVLAAYAFARLQFRGRDALFWVYVATLMVPGTVTVVPLYLMMAQ 131
            + +M   I LG++  S+L+A+A    +F GR   FW+   TLM+P  V +VP Y ++A 
Sbjct: 82  NSLIMALGIALGKIAISLLSAFAIVYFRFPGRMLFFWLIFLTLMLPVEVRIVPTYEVIAN 141

Query: 132 LGLRNTFWALVLPFMFGSPYAIFLLREHFRLIPDDLINAARLDGANTLDVIVHVVIPSSR 191
            G+ N++  L+LP +  S  A FL R+ F  +PD+L  AAR+DGA  +     +++P SR
Sbjct: 142 FGMLNSYQGLILPLV-ASATATFLFRQFFMTVPDELAEAARVDGARPMRFFFDILLPMSR 200

Query: 192 PVLAALAMITVVSQWNNFMWPLVITSGHKWRVLTVATADLQSRFND--QWTLVMAATTVA 249
             +AAL +I  +  WN ++WPL+IT+  +   + +    +    +D   W ++MA + +A
Sbjct: 201 TNIAALFVILFIYGWNQYLWPLLITTDPEMNTIVMGIKQMFPSGDDTADWPVIMATSILA 260

Query: 250 IVPLIALFVTFQRHIVASIVVS 271
           +VP + + +T QR  V  +V S
Sbjct: 261 MVPPVIVVITMQRLFVRGLVES 282