Pairwise Alignments

Query, 600 a.a., Long-chain-fatty-acid-CoA ligase FadD15 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) from Mycobacterium tuberculosis H37Rv

Subject, 568 a.a., AMP-binding family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  278 bits (711), Expect = 4e-79
 Identities = 180/550 (32%), Positives = 273/550 (49%), Gaps = 19/550 (3%)

Query: 62  LISLGVQAGDRVVIFSATRYEWAILDFAILAVGAVTVPTYETSSAEQVRWVLQDSEAVVL 121
           LI LGVQ  DR VI S    +W   D   L   A+ VP Y TS+ EQ  +++ D+ A V+
Sbjct: 24  LIQLGVQVQDRCVILSQNCPQWTCADVGTLKSRAIVVPIYPTSTVEQASFIVNDAAAKVI 83

Query: 122 FAETDSHATMVAELSGSVPALREVL------QIAGSGPNA--LDRLTEAGASVDPAELTA 173
           F +      +  EL    P L  V+      Q+A   P    LD L         AEL  
Sbjct: 84  FVDDAKQYALACELQTLCPTLEHVIVFDAAVQLAQDKPQHKHLDSLLALEYD-QSAELEQ 142

Query: 174 RLAALRSTDPATLIYTSGTTGRPKGCQLTQSNLVHEIKGARAYHPTLLRKGERLLVFLPL 233
           RL      D  TLIYTSGTTG PKG  L   N+   +       P   + G+  L FLPL
Sbjct: 143 RLKDANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTVHQHDLILP--FKTGDVSLAFLPL 200

Query: 234 AHVLARAISMAAFHSKVTVGFTSDIKNLLPMLAVFKPTVVVSVPRVFEKVYNTAEQNAAN 293
           +HV  R  S           +  + + +   ++  +P  +  VPR  EKVY+  +   A 
Sbjct: 201 SHVFERGWSFYVLCRGGRNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAK 260

Query: 294 AGKGR--IFAIA---AQTAVDWSEACDRGGPGLLLRAKHAVFDRLVYRKLRAALGGNCRA 348
           + +GR  +FA A    +   + S+   +GG  L L+ + A  ++LVY KL+A LGG  + 
Sbjct: 261 SAEGRKKLFAWAMGVGERQFEVSQGRVKGGLWLSLQWRLA--NKLVYSKLQAVLGGRLKF 318

Query: 349 AVSGGAPLGARLGHFYRGAGLTIYEGYGLSGTSGGVAISQFNDLKIGTVGKPVPGNSLRI 408
              GGA L   +  F+   G+ +  GYG++ T+  V  +  ++   G+ GK +P   +++
Sbjct: 319 MPCGGAALDLNVASFFHAIGIPVLCGYGMTETNATVTCNTLDNRVAGSNGKVLPEIQIKL 378

Query: 409 ADDGELLVRGGVVFSGYWRNEQATTEAFTDGWFKTGDLGAVDEDGFLTITGRKKEIIVTA 468
             D E+LVRG  V  GY+   + T  AF DGW KTGD G +D  G L IT R KE++ T+
Sbjct: 379 GKDDEILVRGDTVMRGYYNRPEDTAAAFEDGWLKTGDAGRLDAHGNLFITDRIKELMKTS 438

Query: 469 GGKNVAPAVLEDQLRAHPLISQAVVVGDAKPFIGALITIDPEAFEGWKQRNSKTAGASVG 528
            GK +AP  +E  +   P I Q  V+ DA+ ++ ALI    E+ E W +       + + 
Sbjct: 439 NGKYIAPQRVEGTVGRCPFIEQVAVIADARNYVTALIVPAFESLEAWAKEKGLKYESPI- 497

Query: 529 DLATDPDLIAEIDAAVKQANLAVSHAESIRKFRILPVDFTEDTGELTPTMKVKRKVVAEK 588
           +L     ++   +  +K     ++  E I+KF +LP  F+ + G +TPT+K++RK++  K
Sbjct: 498 ELLRHSHVVEHFEQRLKHLQQELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHK 557

Query: 589 FASDIEAIYN 598
           +  +I A+YN
Sbjct: 558 YVHEINAMYN 567