Pairwise Alignments

Query, 510 a.a., Probable UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase MurF from Mycobacterium tuberculosis H37Rv

Subject, 479 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  176 bits (445), Expect = 2e-48
 Identities = 171/519 (32%), Positives = 228/519 (43%), Gaps = 81/519 (15%)

Query: 5   TVAQIAEIVGGAVADISPQDAAHRRVTGTVEFDSRAIGPGGLFLALPGARADGHDHAASA 64
           T A+ A   GG       Q      VTG V  D+R + PG LF+AL  AR DGHD  A A
Sbjct: 6   TAAEAAAATGG-------QARGDWAVTG-VSIDTRELAPGDLFVALTAAR-DGHDFVAQA 56

Query: 65  VAAGAAVVLAAR-PVGV----PAIVVPPVAAPNVLAGVLEHDNDGSGAAVLAALAKLATA 119
           +AAGA   L +R P GV    P ++VP V                       AL  L  A
Sbjct: 57  LAAGAGAALVSRIPEGVAEDAPLLLVPDVQT---------------------ALEALGRA 95

Query: 120 VAAQLVAGGLTIIGITGSSGKTSTKDLMAAVLAPLGEVVAPPGSFNNELGHPWTVLRATR 179
             A+  A    +I ITGS GKTS K++M A LA  G   A   SFNN  G P T+ R   
Sbjct: 96  GRARTEA---RVIAITGSVGKTSAKEMMRAALASQGRAHAAERSFNNHWGVPLTLARMPA 152

Query: 180 RTDYLILEMAARHHGNIAALAEIAPPSIGVVLNVGTAHLGEFGSREVIAQTKAELPQAVP 239
            T+  ++E+   H G IA LA +A P   ++  +  AHL   GS E IA  KA + + + 
Sbjct: 153 GTEVAVIEIGMNHPGEIAPLARMARPHAALITTIAAAHLEALGSLEAIAVEKASIFEGLE 212

Query: 240 HSGAVVLNADDPAVAAMAKLTAARVVRVSRDNTG--------DVWAGPVSLDELARPRFT 291
             G  V+  D P    +         R+    TG        DV A  V    +AR + +
Sbjct: 213 PDGLAVIPGDLPQTPILRAAAEDAGARIESFGTGAGNTHRLSDVQA--VGTAAVARAQLS 270

Query: 292 LHAHDAQAEVRLGVCGDHQVTNALCAAAVALECGASVEQVAAALTA-APPV---SRHRMQ 347
                A+  +++   G H +  AL   A     GA   +   AL A APP    +R R+Q
Sbjct: 271 ----GAEMALKIATPGTHFLETALGVLACVAGVGADPARALMALGAWAPPSGRGTRERLQ 326

Query: 348 V--TTRGDGVTVIDDAYNANPDSMRAGLQALAWIAHQPEATR----RSWAVLGEMAELGE 401
           +        + +IDDA+NANP SM A L  LA  A   +  R    R  A+LG+M ELG 
Sbjct: 327 LDPVIEAMSIELIDDAFNANPTSMGAALDMLAQAAPAHDIGRIAKGRRIAILGDMLELGP 386

Query: 402 DAIAEHDRIGRLAVRLDVSRLVVVG-TGRSISAMHHGAVLEGAWGSGEATADHGADRTAV 460
           D  A H     LA    ++++ +V   G  + A+ H A+ E   G    TA         
Sbjct: 387 DEAAMH---AALAAHPAMAQITLVHCVGPRMQAL-HAALPEDKRGRWVETA--------- 433

Query: 461 NVADGDAALALLRAELRPGDVVLVKASNAAGLGAVADAL 499
                 A +    A +  GDVVLVK S  + +  V DAL
Sbjct: 434 -----QALVPHAHALVDAGDVVLVKGSKGSRVSLVVDAL 467