Pairwise Alignments

Query, 486 a.a., Probable UDP-N-acetylmuramoylalanine-D-glutamate ligase MurD from Mycobacterium tuberculosis H37Rv

Subject, 443 a.a., UDP-N-acetylmuramoylalanine--D-glutamate ligase (RefSeq) from Shewanella loihica PV-4

 Score =  161 bits (407), Expect = 5e-44
 Identities = 151/487 (31%), Positives = 214/487 (43%), Gaps = 72/487 (14%)

Query: 12  LVAGGRVTGQAVAAVLTRFGATPTVCDD-DPVMLRPHAERGLPTV---SSSDAVQQITGY 67
           +V G   TG +V   L + G TP V D  +    R    +  P V   +     + +   
Sbjct: 8   IVLGLGATGLSVVRYLIKQGITPLVMDSRENPPGRETLSQEFPEVLLLTGGFDCRYLVQA 67

Query: 68  ALVVASPGFSPATPLLAAAAAAGVPIWGDVELAWRLDAAGCYGPPRSWLVVTGTNGKTTT 127
           + +V SPG    T  + AA   G+ I GDVEL  R  A      P   + +TG+NGK+T 
Sbjct: 68  SQIVVSPGIPLDTAEVRAAVDMGIDIVGDVELFARALA----DRPACVIGITGSNGKSTV 123

Query: 128 TSMLHAMLIAGGRRAVLCGNIGSAVLDVLDEPAELLAVELSSFQLHWAPSLRPEAGAVLN 187
           T+++  M    G +  + GNIG  VLD+LD   EL  +ELSSFQL    SL   +   LN
Sbjct: 124 TTLVGEMAAKAGLKVAVGGNIGVPVLDLLDGDHELFVLELSSFQLETTSSLNCISATCLN 183

Query: 188 IAEDHLDWHATMAEYTAAKARVL-TGGVAVAGLDDSRAAALLDGSPAQVRVGFRLGEPAA 246
           I+EDH+D ++ +  Y  AK R+     +A+   DD     L   +    +  F L  P  
Sbjct: 184 ISEDHMDRYSDLESYRQAKLRLYDQTKLAIFNRDD----LLTRPNEPMNQNSFGLSLPEG 239

Query: 247 RELGVRDAHLVDRAFSDDLTLLPVASIPVPGPVGVLDALAAAALARSVGVPAGAIADAVT 306
            E GV    LV          +  A + + G     + L A ALA S GV   A+ +   
Sbjct: 240 DEWGVNHGVLV----HGTTEYVAGAQVSLVGSHNQANLLVAMALADSAGVDKAAMVEVAK 295

Query: 307 SFRVGRHRAEVVAVADGITYVDDSKATNPHAARASVLAYP----RVVWIAGGLLKGASLH 362
            F+   HR E+V    G++YV+DSKATN  A  A++        +++ IAGG  KGA   
Sbjct: 296 QFKGLAHRCELVGKHQGVSYVNDSKATNVGATIAALQGLSDHEGQIILIAGGDGKGADF- 354

Query: 363 AEVAAMASRLVGAVLIGRDRAAVAEALSRHAPDVPVVQVVAGEDTGMPATVEVPVACVLD 422
                  S L GA+L                                       V  V+ 
Sbjct: 355 -------STLRGALL--------------------------------------GVGQVIT 369

Query: 423 VAKD-DKAGETVGAAV----MTAAVAAARRMAQPGDTVLLAPAGASFDQFTGYADRGEAF 477
           + KD D+  E    A+    M  AVA A ++A+PGD VLL+PA AS D +  +  RG+ F
Sbjct: 370 LGKDGDRIAEQFDGAIRVESMQEAVAQAAQLAKPGDLVLLSPACASLDMYANFMARGDDF 429

Query: 478 ATAVRAV 484
              V A+
Sbjct: 430 RAQVEAL 436