Pairwise Alignments

Query, 1013 a.a., Probable helicase HelZ from Mycobacterium tuberculosis H37Rv

Subject, 969 a.a., RNA polymerase-associated protein RapA from Vibrio cholerae E7946 ATCC 55056

 Score = 43.9 bits (102), Expect = 5e-08
 Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 837 RLEEILEEILAE-GDRVLCFTQFTEFAELLVPHLAARFGRAARDIAYLHGGTPRKRRDEM 895
           R+  +LE++ A+  +++L        A  L   L  R G  A      H G     RD+ 
Sbjct: 492 RVNWLLEKVKAKRSEKILVIASRASTALQLEQALREREGIRA---TVFHEGMSIIERDKA 548

Query: 896 VARFQSGDGPPIFLLSLKAGGTGLNLTAANHVVHLDRWWNPAVENQATDRAFRIGQRRTV 955
            A F   +G    L+  + G  G N   AN +V  D  +NP +  Q   R  RIGQ+R +
Sbjct: 549 AAYFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRIGQKRDI 608

Query: 956 QV 957
            V
Sbjct: 609 DV 610