Pairwise Alignments

Query, 254 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

Subject, 675 a.a., pseudouridine synthase from Herbaspirillum seropedicae SmR1

 Score =  140 bits (354), Expect = 5e-38
 Identities = 96/244 (39%), Positives = 130/244 (53%), Gaps = 8/244 (3%)

Query: 15  RLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVVRVDGA---RVVLD 71
           +L KVL+ AG+ SRR  E++IV GRV V+G     +G R+ P  AV R++G    R V  
Sbjct: 313 KLHKVLADAGLGSRRDMEELIVAGRVSVNGEPA-HIGQRILPTDAV-RINGKLIQRKVSK 370

Query: 72  DSLVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGTKKLFHVGRLDADTEGLMLLTND 131
                L  +KP G   + +D  GR  + D +     G  K   VGRLD +TEGL+L T  
Sbjct: 371 RPPRVLVYHKPAGEIVSHADPEGRNSVFDRLPTMKAG--KWLAVGRLDYNTEGLLLFTTS 428

Query: 132 GELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDFAVVDAIPGKT 191
           G+LA+RLMHP + + + Y     G +  G+ + L +G+ELDDGPA     A         
Sbjct: 429 GDLANRLMHPRYNIEREYAVRTLGELEEGMRQKLLSGVELDDGPAQFSRIADGGGEGVNK 488

Query: 192 LVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSLGKQ-RPGSVRALRSNEIGQLYQ 250
             RVT+ EGRNR VRR+  A G  V  L+RT  GA++L +  R G    L  N +  L  
Sbjct: 489 WYRVTIGEGRNREVRRMFEAVGLTVSRLIRTRYGAMTLPQTLRRGRWEELEENAVRNLMA 548

Query: 251 AVGL 254
           A GL
Sbjct: 549 ACGL 552