Pairwise Alignments

Query, 904 a.a., Probable DNA polymerase I PolA from Mycobacterium tuberculosis H37Rv

Subject, 921 a.a., DNA polymerase I from Pseudomonas syringae pv. syringae B728a

 Score =  510 bits (1313), Expect = e-148
 Identities = 340/933 (36%), Positives = 502/933 (53%), Gaps = 65/933 (6%)

Query: 17  LMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVSR 76
           L+L+DG+S  +RAF+ALP     T  GL T AV G   ML +L R    + +A  FD   
Sbjct: 6   LVLVDGSSYLYRAFHALPP--LATSKGLPTGAVKGVLNMLKSLRRQYPDSPLAVVFDAKG 63

Query: 77  QTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQAE 136
            TFR   Y +YKANR S PD+   Q+D+    +  +G   L   G EADD+I TLA  + 
Sbjct: 64  GTFRDALYNDYKANRPSMPDDLRVQVDLLHACVKGMGYPFLCVEGVEADDVIGTLARSSA 123

Query: 137 NEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAAL 196
                V++ TGD+D  QLV   +T++    G    +      V EK+G+ P    D+ AL
Sbjct: 124 AADRPVVISTGDKDMAQLVDGHITLVNTMTG----SVLDVAGVKEKFGVGPEHIIDYLAL 179

Query: 197 RGDPSDNLPGIPGVGEKTAAKWIAEY-GSLRSLVDNVDAVRGKVGDALRANLASVVRNR- 254
            GD  DN+PG+PGVGEKTA   +    G ++ L +N+D V        +   A +  +R 
Sbjct: 180 MGDKVDNIPGVPGVGEKTAVGLLVGIGGGIKELYENLDKVASLPIRGAKTLAAKLEEHRE 239

Query: 255 ------ELTDLVRDVPLAQTPDTLRLQPWDRDHIHRLFDDLEFRV-LRDRLFDTLAAAGG 307
                 EL  +  DVPL    D L     DRD +  L+ +LEF+  + D   D   A   
Sbjct: 240 MAFLSYELATIKIDVPLDIELDQLHCGEPDRDTLMELYAELEFKSWIEDLQRDAKRAGQE 299

Query: 308 PEVDE-GFDVRGGA----LAPGTVRQWLAE-------------HAGDGRRAGLTVVGTHL 349
             ++E   + R  A    L  G    WL +             +  D +RA L  +   +
Sbjct: 300 LTIEEPTAEAREAAYEVILEQGQFDAWLKKLQAAPLFAFVTQSNGTDAQRAQLVGLSFAI 359

Query: 350 PHGGDATAMAVAAADGEGAYLDTATLTPDDDAALAAWLADPAKPKALHEAKAAVHDLA-- 407
                A      +  G    LD  T+      AL   L DP K K    AK A++ LA  
Sbjct: 360 QTHEAAYIPLTHSYMGVPQQLDRDTVL----KALKPLLEDPDKIKVGQHAKFAINLLANC 415

Query: 408 ------GRGWTLEGVTSDTALAAYLVRPGQRSFTLDDLSLRYLR------RELRAETPQQ 455
                  +G  L+GV  DT L +Y++         D L  +YL       +E+  +  +Q
Sbjct: 416 AIDGDQAQGIDLQGVRFDTILESYVLDSTATRHDRDSLVAKYLTHTPINFQEIAGKGAKQ 475

Query: 456 ---QQLSLLDDDDTDAETIQTTILRARAVIDLADALDAELARIDS-TALLGEMELPVQRV 511
               Q++L    +  AE    T       + L +  DA LA I +   +L ++E+P+  V
Sbjct: 476 LSFDQIALEQAGNYAAEEADLT-------LRLHEVFDARLAAIPTLQPVLNDIEMPLVPV 528

Query: 512 LAKMESAGIAVDLPMLTELQSQFGDQIRDAAEAAYGVIGKQINLGSPKQLQVVLFDELGM 571
           LA++E  G  VD  +L     + GD++      A+ + G++ NLGSPKQL V+L+++LGM
Sbjct: 529 LARIERQGALVDANLLGIQSVELGDKMTALEREAFAIAGEEFNLGSPKQLGVILYEKLGM 588

Query: 572 PKTKRTKTGYTTDADALQSLFDKTGHPFLQHLLAHRDVTRLKVTVDGLL--QAVAADGRI 629
           P   +T TG  + A+A+ +   +   P  + L+ +R +++LK T    L  Q     GRI
Sbjct: 589 PILSKTATGQASTAEAVLAELAEQDFPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRI 648

Query: 630 HTTFNQTIAATGRLSSTEPNLQNIPIRTDAGRRIRDAFVVGDGYAELMTADYSQIEMRIM 689
           HT+++Q +A TGRLSS++PNLQNIPIRT  GRRIR AFV   GY +L+ ADYSQIE+RIM
Sbjct: 649 HTSYHQAVAVTGRLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGY-KLLAADYSQIELRIM 707

Query: 690 AHLSGDEGLIEAFNTGEDLHSFVASRAFGVPIDEVTGELRRRVKAMSYGLAYGLSAYGLS 749
           AHL+ DEGL+ AF    D+H   A+  FGV ++ VT ++RR  KA+++GL YG+SA+GL+
Sbjct: 708 AHLAQDEGLLHAFRNDLDVHRATAAEVFGVELENVTTDMRRSAKAINFGLIYGMSAFGLA 767

Query: 750 QQLKISTEEANEQMDAYFARFGGVRDYLRAVVERARKDGYTSTVLGRRRYLPELDSSNRQ 809
           +Q+ +  +++   +D YFAR+ GV +Y+     +A + G+  T+ GRR YLP++++ N+ 
Sbjct: 768 KQIGVDRKQSQAYVDRYFARYPGVLNYMERTRAQAAEQGFVETIFGRRLYLPDINAKNQS 827

Query: 810 VREAAERAALNAPIQGSAADIIKVAMIQVDKALNEAQLASRMLLQVHDELLFEIAPGERE 869
           +R+ AER A+NAP+QG+AADIIK AM+ V+  L+E+ L +R++LQVHDEL+ E+     +
Sbjct: 828 LRKGAERMAINAPMQGTAADIIKKAMVAVNGWLDESGLDARVILQVHDELVLEVREDLVD 887

Query: 870 RVEALVRDKMGGAYPLDVPLEVSVGYGRSWDAA 902
           ++   +R  M GA  L VPL V VG G +WD A
Sbjct: 888 QISEQIRPHMSGAAELAVPLLVEVGVGNNWDEA 920