Pairwise Alignments

Query, 904 a.a., Probable DNA polymerase I PolA from Mycobacterium tuberculosis H37Rv

Subject, 913 a.a., DNA polymerase I from Paraburkholderia bryophila 376MFSha3.1

 Score =  515 bits (1327), Expect = e-150
 Identities = 332/918 (36%), Positives = 499/918 (54%), Gaps = 47/918 (5%)

Query: 16  TLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAMLINLLRDEAPTHIAAAFDVS 75
           TL+L+DG+S  +RA++A+P  + +   G  T A+YG   ML  + ++    + A  FD  
Sbjct: 11  TLLLVDGSSYLYRAYHAMP--DLRGPDGGPTGALYGMINMLRRMRKEVTAEYSACVFDAK 68

Query: 76  RQTFRLQRYPEYKANRSSTPDEFAGQIDITKEVLGALGITVLSEPGFEADDLIATLATQA 135
            +TFR   YP+YKANR S PD+ + QI+     + ALG  +L   G EADD+I TL+T+A
Sbjct: 69  GKTFRDDWYPDYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIDGVEADDVIGTLSTEA 128

Query: 136 ENEGYRVLVVTGDRDALQLVSDDVTVLYPRKGVSELTRFTPEAVVEKYGLTPRQYPDFAA 195
           E  G  V+V TGD+D  QLVSD VT++          +     V+ K+G+ P +  D+ +
Sbjct: 129 EKRGMNVIVSTGDKDLAQLVSDHVTLINTMTN----EKLDRAGVLAKFGVPPERIVDYLS 184

Query: 196 LRGDPSDNLPGIPGVGEKTAAKWIAEYGSLRSLVDNVDAVRGKVGDALRANLASVVRNRE 255
           L GD  DN+PG+   G KTA KW++++ SL  +V + D ++G VGD LR  L  +   R+
Sbjct: 185 LIGDTVDNVPGVEKCGPKTALKWLSQFESLDGIVAHADEIKGAVGDNLRRALDFLPMARK 244

Query: 256 LTDLVRDVPLA----QTPDTLRLQPWDRDHIHRLFDDLEFRVLRDRLFDTLAAAGGPEVD 311
           L  + R   L        + L+ +P  R+ +  +F    F+    R  +   A  GPE D
Sbjct: 245 LVTVERHCDLTGHLTSIEENLQSRPESREELRDVFTRHGFKTWL-REVEIADAVEGPETD 303

Query: 312 EGFDVRGGALAPG------TVRQWLAEHAGDGR--RAGLTVVGTHL----PHGGDATAMA 359
                   AL+        TV+ W    A   +   AGLT   T      P       ++
Sbjct: 304 VP-----PALSVDHERHYETVQTWEQFDAWLQKINAAGLTSFDTETTSLDPMTAQIVGLS 358

Query: 360 VAAADGEGAYLDTATLTPDDD---------AALAAWLADPAKPKALHEAKAAVHDLAGRG 410
           ++   G  AY+  A   PD           A L  WL      K     K     LA  G
Sbjct: 359 LSVEAGHAAYVPLAHRGPDAPVQLPRDEVLARLKPWLESAEYKKVGQHLKYDEQVLANYG 418

Query: 411 WTLEGVTSDTALAAYLVRPGQRSFTLDDLSLRYLR-RELRAETPQQQQLSLLDDDDTDAE 469
             + GV  DT L +Y++    R   +D+L+LR+L  + ++ E    +    +  D+   +
Sbjct: 419 IEMRGVEHDTLLQSYVLE-SHRPHDMDNLALRHLGIKTIKYEDVAGKGAQQIGFDEVALD 477

Query: 470 -TIQTTILRARAVIDLADALDAELARIDSTA-LLGEMELPVQRVLAKMESAGIAVDLPML 527
              +     A   + L  AL  +LA  ++   +  ++E+P  RVL KME  G+ +D   L
Sbjct: 478 KAAEYAAEDADVTLRLHQALYPQLAAEEALEHVYRDIEVPTSRVLRKMERTGVLIDAEKL 537

Query: 528 TELQSQFGDQIRDAAEAAYGVIGKQINLGSPKQLQVVLFDELGMPKTKRTKTGY-TTDAD 586
            +  S+   ++      AY + G + NLGSPKQ+  + F+ L +P  K+T +G  +TD +
Sbjct: 538 RQQSSEIAARLIQLESEAYVLAGGEFNLGSPKQIGQIFFERLELPVVKKTPSGAPSTDEE 597

Query: 587 ALQSLFDKTGHPFLQHLLAHRDVTRLKVTVDGLLQAV--AADGRIHTTFNQTIAATGRLS 644
            LQ L +   +P  + LL HR +++LK T    L  +  A  GR+HT + Q +A TGRL+
Sbjct: 598 VLQKLAED--YPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLA 655

Query: 645 STEPNLQNIPIRTDAGRRIRDAFVVGDGYAELMTADYSQIEMRIMAHLSGDEGLIEAFNT 704
           S +PNLQNIP+RT  GRRIR+AF+   G+ +L++ADYSQIE+RIMAH+SGDE L+ AF+ 
Sbjct: 656 SNDPNLQNIPVRTGEGRRIREAFIAPPGH-KLVSADYSQIELRIMAHISGDESLLRAFSQ 714

Query: 705 GEDLHSFVASRAFGVPIDEVTGELRRRVKAMSYGLAYGLSAYGLSQQLKISTEEANEQMD 764
           GED+H   A+  F V   EV+ + RR  K +++GL YG+S++GL+  L I+ + A   +D
Sbjct: 715 GEDIHRATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYID 774

Query: 765 AYFARFGGVRDYLRAVVERARKDGYTSTVLGRRRYLPELDSSNRQVREAAERAALNAPIQ 824
            YFAR+ GV  Y+      A+  GY  TV GRR +LPE++  N   R+AAERAA+NAP+Q
Sbjct: 775 RYFARYPGVARYMDETRLSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQ 834

Query: 825 GSAADIIKVAMIQVDKALNEAQLASRMLLQVHDELLFEIAPGERERVEALVRDKMGGAYP 884
           G+AAD+IK++MI V K + +A++ +RM++QVHDEL+ E+   E   V   + + M G   
Sbjct: 835 GTAADLIKLSMIAVQKWIEQARIGTRMIMQVHDELILEVPDAELSEVHQRLPELMCGVAA 894

Query: 885 LDVPLEVSVGYGRSWDAA 902
           L VPL   VG G +W+ A
Sbjct: 895 LKVPLVAEVGAGLNWEEA 912