Pairwise Alignments

Query, 518 a.a., Aminoglycosides/tetracycline-transport integral membrane protein from Mycobacterium tuberculosis H37Rv

Subject, 477 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (307), Expect = 2e-32
 Identities = 123/488 (25%), Positives = 215/488 (44%), Gaps = 53/488 (10%)

Query: 14  LAVLLGALDTYVVVTIMRDIMNSVGIPINQLHRITWIVTMYLLGYIAAMPLLGRASDRFG 73
           L + L A+D  ++ T    I+  +G     L   +WI   Y+L   A++P+ G   D++G
Sbjct: 19  LPMFLAAVDQTLLATATPAIVRDLG----NLQLSSWIAIGYMLASAASVPVYGWLGDQYG 74

Query: 74  RKLMLQVSLAGFIIGSVVTALAGHFGDFHMLIAGRTIQGVASGALLPITLALGADLWSQR 133
           RK ML ++L+ F +GSV+ A A    +   L+AGR +QG+ SG L+ ++ AL  +L   R
Sbjct: 75  RKPMLMIALSIFALGSVICAFA---MNMPWLVAGRIVQGLGSGGLMSLSQALIGELVPPR 131

Query: 134 NRAGVLGGIGAAQELGSVLGPLYGIFIVWLLHDWRDVFWINVPLTAIAMV-MIHFSLPSH 192
            RA   G   +   + S+ GP+ G  +V  L  W+ +FW N+PL  IA+  +  F     
Sbjct: 132 ERARFQGYFSSLFAVASIGGPVLGGVLVTYL-SWQWLFWFNLPLVGIALYRLARFQFVQS 190

Query: 193 DRSTEPERVDLVGGLLLALALGLAVIGLYNPNPDGKHVLPDYGAP--LLVGALVAAVAFF 250
            R +E   +D+ G +L    + L +  L      G H  P +      LV A V     F
Sbjct: 191 SRKSEAS-IDVAGLILFPSMMTLIIYWL----SAGGHYFPWFSVTSISLVSAFVLTSLLF 245

Query: 251 GWER------FARTRLIDPAGVHFRPFLSALGASVAAGAALMVTLVDVELFGQGVLQMDQ 304
             ++      F   RL+    +H  P LS    +    A L   +  + +F Q  L+++ 
Sbjct: 246 IAQQKRVTASFLPLRLLARREIHI-PLLS----TFIFAACLFALIFFLPIFLQLGLRVNA 300

Query: 305 AQAAGMLLWFLIALPIGAVTGGWIATRAG-DRAVAFAGLLIAAYGYWLISHWPVDLLADR 363
           AQ+  +L+     +  GA T G +  + G  + +   G+ +++  + +++ + +      
Sbjct: 301 AQSGLLLIPLSCGIIGGAYTTGKVIAKTGVPKFLPVFGMSLSSCAFAVLAMFSL------ 354

Query: 364 HNILGLFTVPAMHTDLVVAGLGLGLVIGPLSSATLRVVPSAQHGIASAAVVVARMTGMLI 423
                  + P +     + GLGLG V+         +   A  G  +A   ++R  G  +
Sbjct: 355 -------SAPVVSAIAALCGLGLGTVMPSTQVLVQTLAGKANLGRITAMASLSRSLGASV 407

Query: 424 GVAALSAWGLYRFNQILAGLSAAIPPNASLLERAAAIGARYQQAFALMYGEIFTITAIVC 483
           G A         F  ++  L   + PN+ L   AA   +    AF +     F + A++ 
Sbjct: 408 GTAF--------FGTLIYSLLPGLSPNSGLQAIAALPQSEILHAFQIG----FAVAALLA 455

Query: 484 VFGAVLGL 491
           + GA+  L
Sbjct: 456 LLGALNAL 463