Pairwise Alignments

Query, 612 a.a., Probable oligopeptide-transport ATP-binding protein ABC transporter OppD from Mycobacterium tuberculosis H37Rv

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  511 bits (1315), Expect = e-149
 Identities = 291/612 (47%), Positives = 394/612 (64%), Gaps = 10/612 (1%)

Query: 1   MSPLLEVTDLAVTFRTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVVGLLPE 60
           MS LL V +L   F   G  +TAV G+S+ V PGE  A++GESG GKSA A+A++ LLP 
Sbjct: 1   MSDLLSVRNLKAGFLAGGRVLTAVDGVSFAVAPGETFALLGESGCGKSATALALLRLLPN 60

Query: 61  YAQVRGS-VRLQGTELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEAIEVH 119
             +++G  V L+G E+L L + AM   RG A   +FQ+P ++L PV T+G QI E++E H
Sbjct: 61  AGRIQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIGESLERH 120

Query: 120 QPRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDLLICD 179
           +   G+ AARR A+ LL  VGI+ P+RR   +P +LSGG +QR +IAIA+A +P LLI D
Sbjct: 121 RGMKGE-AARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEPRLLIAD 179

Query: 180 EPTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVESAGV 239
           EPTTALDVT+QAQILD+L   +     G+L+ITHDLGVVA  A R  VMYAG +VE+A  
Sbjct: 180 EPTTALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEIVETAPR 239

Query: 240 NDLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLVIDEC 299
            + +   R PYT  L  ++P L   +G +L  IPG  P LA +  GC FAPRCP+ +D C
Sbjct: 240 QEFFASPRHPYTQKLFAALPDL-GQRGAQLATIPGQVPGLAAMPAGCRFAPRCPVAMDRC 298

Query: 300 LTAEPELLDVATDHRAAC--IRTELVTGRSAA-DIYRVKTEARPAALGDASVVVRVRHLV 356
               P   ++   H+  C  +  +L  G     D+      A  AA      ++ V  L 
Sbjct: 299 RLESPGWTELEAGHQVRCHWVAQQLPGGEQRLPDLPAAPPAAAAAADAARENLLAVGELK 358

Query: 357 KTYRLAKGVVLRRAIGEVRAVDGISLELRQGRTLGIVGESGSGKSTTLHEILELAAPQSG 416
             + + KG+  +R +G V+AVDG+SLEL++GRTL +VGESG GK+T    +L L  P +G
Sbjct: 359 VHFPIRKGL-FKRTVGHVKAVDGVSLELQRGRTLALVGESGCGKTTAGKAVLRLL-PATG 416

Query: 417 SIEVLGTDVATLGTAERRSLRRDIQVVFQDPVASLDPRLPVFDLIAEPLQAN--GFGKNE 474
           S+ + G ++  L   E + LRR +Q+VFQDP ASL+PRL V ++I E + A      ++E
Sbjct: 417 SVRLDGRELLGLPERELKPLRRRMQMVFQDPFASLNPRLTVGEIIEEGMTALRVAASRDE 476

Query: 475 THARVAELLDIVGLRHGDASRYPAEFSGGQKQRIGIARALALQPKILALDEPVSALDVSI 534
             A +A LL+ VGL      RYP EFSGGQ+QRI IARALA+QP++L  DEP SALDVS+
Sbjct: 477 RRAALAALLESVGLPAEALGRYPHEFSGGQRQRIAIARALAVQPELLVCDEPTSALDVSV 536

Query: 535 QAGIINLLLDLQEQFGLSYLFVSHDLSVVKHLAHQVAVMLAGTVVEQGDSEEVFGNPKHE 594
           QA I+NLL  LQE+ GL+YLF++H+ +VV++LAH VAVM  G +VEQG  ++V   P H 
Sbjct: 537 QAQILNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQQVLAAPCHP 596

Query: 595 YTRRLLGAVPQP 606
           YTR LL AVP+P
Sbjct: 597 YTRALLSAVPEP 608



 Score =  204 bits (519), Expect = 1e-56
 Identities = 129/309 (41%), Positives = 169/309 (54%), Gaps = 16/309 (5%)

Query: 4   LLEVTDLAVTF--------RTDGDPVTAVRGISYRVEPGEVVAMVGESGSGKSAAAMAVV 55
           LL V +L V F        RT G  V AV G+S  ++ G  +A+VGESG GK+ A  AV+
Sbjct: 351 LLAVGELKVHFPIRKGLFKRTVGH-VKAVDGVSLELQRGRTLALVGESGCGKTTAGKAVL 409

Query: 56  GLLPEYAQVRGSVRLQGTELLGLADNAMSRFRGKAIGTVFQDPMSALTPVYTVGDQIAEA 115
            LLP      GSVRL G ELLGL +  +   R + +  VFQDP ++L P  TVG+ I E 
Sbjct: 410 RLLP----ATGSVRLDGRELLGLPERELKPLR-RRMQMVFQDPFASLNPRLTVGEIIEEG 464

Query: 116 IEVHQPRVGKKAARRRAVELLDLVGISQPQRRSRAFPHELSGGERQRVVIAIAIANDPDL 175
           +   +    +   R     LL+ VG+  P      +PHE SGG+RQR+ IA A+A  P+L
Sbjct: 465 MTALRVAASRDERRAALAALLESVGL--PAEALGRYPHEFSGGQRQRIAIARALAVQPEL 522

Query: 176 LICDEPTTALDVTVQAQILDVLKAARDVTGAGVLIITHDLGVVAEFADRALVMYAGRVVE 235
           L+CDEPT+ALDV+VQAQIL++L+  ++  G   L ITH+  VV   A    VMY GR+VE
Sbjct: 523 LVCDEPTSALDVSVQAQILNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVE 582

Query: 236 SAGVNDLYRDRRMPYTVGLLGSVPRLDAAQGTRLVPIPGAPPSLAGLAPGCPFAPRCPLV 295
              V  +      PYT  LL +VP    A    +V +PG  PS A    GC F PRC   
Sbjct: 583 QGPVQQVLAAPCHPYTRALLSAVPEPRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQA 642

Query: 296 IDECLTAEP 304
            + C    P
Sbjct: 643 SERCRQEYP 651