Pairwise Alignments

Query, 563 a.a., Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) from Mycobacterium tuberculosis H37Rv

Subject, 472 a.a., DEAD/DEAH box helicase from Rhodopseudomonas palustris CGA009

 Score =  306 bits (785), Expect = 9e-88
 Identities = 166/389 (42%), Positives = 243/389 (62%), Gaps = 12/389 (3%)

Query: 14  TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
           +F++L +  +V  A+   GY SPT IQ   IP ++A  DV+G+AQTGTGKTAAF +PML+
Sbjct: 2   SFSNLGLSEKVQAAVAAAGYVSPTPIQQQAIPHVLARKDVLGIAQTGTGKTAAFVLPMLT 61

Query: 74  KID---ITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLR 130
            ++     +++P+ L+L PTRELA QV E F +YGA   +LNV  + GG S+  Q   L 
Sbjct: 62  MLEKGRARARMPRTLILEPTRELAAQVKEQFDKYGAG-QKLNVALLIGGVSFGDQDLKLT 120

Query: 131 RGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQV 190
           RG  V++ TPGR++DH ER  L L+ V+ L++DEAD ML MGF  D+ERI    P  +Q 
Sbjct: 121 RGVDVLIATPGRLLDHTERGGLLLTGVEMLIIDEADRMLDMGFIPDIERICKLVPFTRQT 180

Query: 191 ALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR----KMDALTRVLE 246
             F+ATMP  IR+++  +LH+P ++      + A  ++QS +   R    K + L R++ 
Sbjct: 181 LFFTATMPTEIRRITETFLHNPEKIEVSKPASTAVTVTQSQVPCGREPHEKRETLRRLIR 240

Query: 247 -VEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILV 305
                +  I+F   K+    +A+ L+  GFS  A+ GD+ Q  R   + A R GD+ ILV
Sbjct: 241 GATDLKNAIIFCNRKREVALLAKSLQRHGFSVGALHGDMDQTARTAALEAFRKGDLPILV 300

Query: 306 ATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAI 365
           A+DVAARGLD+  +SHV N+D+PH  + YVHRIGRTGRAGR+G A+  V+P +   + A+
Sbjct: 301 ASDVAARGLDIPEVSHVFNFDVPHHPDDYVHRIGRTGRAGRTGTAVTIVAPSDQKSMAAV 360

Query: 366 EKATRQTLTEAQL-PTVED--VNTQRVAK 391
           EK   Q ++ A++ P+VE    NT+  A+
Sbjct: 361 EKLIGQAISRAEVGPSVESEAANTEAEAE 389