Pairwise Alignments

Query, 274 a.a., Probable sugar-transport integral membrane protein ABC transporter SugB from Mycobacterium tuberculosis H37Rv

Subject, 281 a.a., carbohydrate ABC transporter permease from Rahnella sp. WP5

 Score =  195 bits (496), Expect = 8e-55
 Identities = 99/267 (37%), Positives = 162/267 (60%), Gaps = 17/267 (6%)

Query: 8   YWAVLDTLVVGYALLPVLWIFSLSLKPTSTVKDGKLIPSTVTFDNYRGIFRGDLFSSALI 67
           Y+A++ +L  G  L  V+W+                 P  + + NY      +  + +L 
Sbjct: 32  YYAIITSLRSGANLFTVIWL-----------------PDEMNWGNYVTALMDNGIARSLF 74

Query: 68  NSIGIGLITTVIAVVLGAMAAYAVARLEFPGKRLLIGAALLITMFPSISLVTPLFNIERA 127
           NS  +  +T  + +++   AA+A++R+ F G++ L+   L ++MFP +++++ +F + R 
Sbjct: 75  NSAVVATLTVGLCLLVSITAAFALSRIRFTGRKYLLFTILCVSMFPQVAVLSGMFELVRF 134

Query: 128 IGLFDTWPGLILPYITFALPLAIYTLSAFFREIPWDLEKAAKMDGATPGQAFRKVIVPLA 187
           +GL+D+   L+L Y TF+LP  I+ L+ F + IP +LE+AA +DGA+      ++ VP+ 
Sbjct: 135 MGLYDSLGALVLSYTTFSLPFTIWVLTTFMKAIPVELEEAAIVDGASTWTIISRIFVPIM 194

Query: 188 APGLVTAAILVFIFAWNDLLLALSLTATKAAITAPVAIANFTGSSQFEEPTGSIAAGAIV 247
            P LVT  +L FI AWN+ + AL+   +    T PVAI+   GSSQFE P G+I A +++
Sbjct: 195 GPSLVTTGLLAFIGAWNEFMFALTFVISGDKRTVPVAISMLQGSSQFELPWGAIMASSVI 254

Query: 248 ITIPIIVFVLIFQRRIVAGLTSGAVKG 274
           +T+PI+V VLIFQRRIV+GLT+GAVKG
Sbjct: 255 VTLPIVVLVLIFQRRIVSGLTNGAVKG 281