Pairwise Alignments

Query, 487 a.a., Probable transmembrane protein from Mycobacterium tuberculosis H37Rv

Subject, 500 a.a., Possibly related to ydbT from Xanthomonas campestris pv. campestris strain 8004

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 125/470 (26%), Positives = 196/470 (41%), Gaps = 37/470 (7%)

Query: 2   TDRPHDWHRLSPRMLLVHPVHEMLRQLPVLIGSVVLGSATGNP-----VWPLAALGVTVV 56
           TD     H LS   +L+  + + L  L  LI   + GS  G+      +     + V V 
Sbjct: 8   TDDEQRLHPLSWLFVLLQQIRQFLIPLAALI---LFGSRDGSRDSADHLATGIVIAVLVA 64

Query: 57  FGVLRWFFTTYRIDDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVLRVGT 116
             VLR+F   YRI  + V++R+G+L R    +P  RI +V     LLHRL G+  +R+ +
Sbjct: 65  ISVLRYFTYRYRIGSDGVAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAGVAEVRLES 124

Query: 117 GQEARGEAAFELDAVDSA----RVPRLRALLLAESLAPVEP-TGRVLARWQSSWLRYAPL 171
               + EA   +  +D A     + R RA     + A   P  G +L    S  +R   +
Sbjct: 125 AGGHKPEAEMRVLRLDQALALEDLIRRRAHTAEPATAHQAPDVGTLLRLPTSEVIRLGLI 184

Query: 172 SFSGLVMIGAVIGLGYQTGLAVRLPESGFARSAVDAAQR--AGVVLVVAVTVLLVVGVSA 229
           S  G+V++ A  G+ YQ  +  R   S F     + A R  A +    AVT  LVV    
Sbjct: 185 SNRGMVVVAAGFGVLYQ--MIPRRTVSNFVEHNGELAYRYVAQIHPGTAVTATLVVLGML 242

Query: 230 LLAVLFSWLTYGNLLLRRGG---SGQEGVLHLRHGLLRVREHTYDMRRLRGATLREPLLV 286
           ++ V    L+    + +  G   S  E  L +  GLL     +  +RR++  TL E  L 
Sbjct: 243 VVLVAMRALSVALAVAQYHGFHLSESERRLTVERGLLTRIRSSVALRRIQSWTLYESRLH 302

Query: 287 RLL--RGARLD-AVMTGVHGEGQSSMLLPPCPFETATAVLTDLIDNTDAAAGPLRRHGPA 343
            L   R  R+D AV TG +       L P    +   A+L  L+ +    A P     P 
Sbjct: 303 ALFGRRQLRVDTAVTTGDNDGAALKELAPIAEPQRCDALLQQLLPD---VAWPPAAWQPV 359

Query: 344 AARRRWTRALLVPTLAGVALIAAAPILGVPGW---AWTLWAVL-TAGCAGLAVDRVRSLG 399
           A    W   L +PT     ++   P+  V  W   A   W +L     A  A  +V+ +G
Sbjct: 360 ATHCWW--RLSLPT-----VLLVLPLTAVLAWRFGAQASWLLLWLPWSAFKAYRQVQRMG 412

Query: 400 HRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAAT 449
           + +   ++  R G  +R         +    ++++   R +G ATL+  T
Sbjct: 413 YALDARYVAVRGGWWKRWWRLAELDKLQALQLQRSPLDRLSGTATLLLDT 462



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 21/73 (28%), Positives = 34/73 (46%)

Query: 382 VLTAGCAGLAVDRVRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAG 441
           ++ A    ++V R  +  +R+    +  R+G L+R R  I    I    V Q+L  R AG
Sbjct: 57  IVIAVLVAISVLRYFTYRYRIGSDGVAIRSGLLERSRRDIPFARIHNVVVHQSLLHRLAG 116

Query: 442 VATLVAATVAGRK 454
           VA +   +  G K
Sbjct: 117 VAEVRLESAGGHK 129