Pairwise Alignments

Query, 487 a.a., Probable transmembrane protein from Mycobacterium tuberculosis H37Rv

Subject, 492 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 116/479 (24%), Positives = 190/479 (39%), Gaps = 43/479 (8%)

Query: 1   MTDRPHDWHRLSPRMLL---VHPVHEMLRQLPVLIGSVVLGSATGNPVWPLAALGVTVVF 57
           M+    +W  LSP  ++   +    ++L Q   LI  V  G   G     + ++ + V+ 
Sbjct: 1   MSATAENWQSLSPWSVVSFTLGTARQVLTQGYALIPIVFTGWKQGFDSPLVISVALLVLL 60

Query: 58  GVLRWF---FTTYRI--DDENVSLRTGILSRRAVSVPRNRIRSVQTEARLLHRLLGLTVL 112
           G+L +    + TYR       + +R G+  +R   +P ++I++V+ +     + L L  L
Sbjct: 61  GILTFALVQYATYRFRPGSHKLEVRRGLFFKRKDELPLDKIQNVRLDQPFYFKPLLLCTL 120

Query: 113 RVGTGQEARGEAAFELDAVDSARVPRLRALLLAESLA--PVEPTGRVLARWQSSWLRYA- 169
            V T       A    D V  A +P   A+ L   L   P EP      +  S  L    
Sbjct: 121 VVET-------AGSRKDEVQIAAMPLSNAMALKSHLLQKPAEPVNHHEEQTDSLLLERGG 173

Query: 170 -PLSFSGLVMIGAVIGLGYQTGLAVRLP-ESGFARSAVDAAQRA-------GVVLVVAVT 220
            PL   GL     V  + +   +  +LP ES F    ++   R        G + V+A+ 
Sbjct: 174 KPLFLFGLYHNNFVWFMVFAGSIMGQLPVESWFESLGLNTFVRIESQGPLWGTLSVIAL- 232

Query: 221 VLLVVGVSALLAVLFSWLTYGNLLLRRGGSGQEGVLHLRHGLLRVREHTYDMRRLRGATL 280
           +LL     AL++VLF++L Y    L+ G    E  L    G+L  ++    M+R++    
Sbjct: 233 ILLGYICFALISVLFAFLKYYPYRLKLGA---ESTLERTGGILAHQQDALAMKRIQLVEF 289

Query: 281 REPLLVRLLRGARLDAVMTGVHG-EGQSSMLLPPCPFETATAVLTDLIDNTDAAAG---- 335
            +P + RLL+  R       V G E +  + LP          L  L     A  G    
Sbjct: 290 NQPPIARLLK--RWTVFFRQVQGHEVEQHLKLPLLIPSVTPDELPPLFAQLKALPGQDSL 347

Query: 336 PLRRHGPAAARRRW-TRALLVPTLAGVALIAAAPILGVPGWAWTLWAVLTAGCAGLAVDR 394
           P + H        W  R L    L  +  +  +  L V   A T   V   G  GL + R
Sbjct: 348 PPQVHELRPIHNGWLKRRLAFVWLPALLTMLISRELVVIELALT---VAILGSVGLWL-R 403

Query: 395 VRSLGHRVADGWLVARAGSLQRRRDCIACTGIIGWTVRQTLFQRRAGVATLVAATVAGR 453
            +  G+R  D  +  R G L +    +    +   ++ Q+  QR+ G+ATL     +G+
Sbjct: 404 FKHWGYRHDDTLVWQRTGLLGQSIKRVPLYKVQHVSLLQSPGQRKKGLATLELGLASGK 462