Pairwise Alignments

Query, 393 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

Subject, 325 a.a., 40-residue YVTN family beta-propeller repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 9/133 (6%)

Query: 53  VTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVA 112
           VTN   DT+SV+   T  V +T+ +   P  I     + +R Y+    S  D + V+D  
Sbjct: 28  VTNEKDDTISVIDIATLEVVRTIETGERPRGITFSK-DYSRVYICASDS--DTVQVMDPV 84

Query: 113 TNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGT 172
           T  +L   P         L P+D++LY++      A   V+DT +  +I  +DV    G 
Sbjct: 85  TGEILHDLPSGEDPEQFVLHPNDRHLYIANED--DAITTVVDTESRQVIAQIDV----GI 138

Query: 173 TTQCVRMSPDGSV 185
             + + +SPDG +
Sbjct: 139 EPEGMAVSPDGKI 151



 Score = 44.7 bits (104), Expect = 4e-09
 Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 17/165 (10%)

Query: 232 AGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIG 291
           A L VV TI+ G   R +  S D +  Y+ +  SD    V V+D  T +I       E  
Sbjct: 42  ATLEVVRTIETGERPRGITFSKDYSRVYICASDSD---TVQVMDPVTGEILHDLPSGED- 97

Query: 292 GLVTRVSVSGDADRAYLVSEDR--VTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLY-- 346
               +  +  +    Y+ +ED    TV+ T +  VI  I  G +P  +  SPDGK     
Sbjct: 98  --PEQFVLHPNDRHLYIANEDDAITTVVDTESRQVIAQIDVGIEPEGMAVSPDGKIAITT 155

Query: 347 -----IADYSGTITRTAVASTIVSGTEQLA-LQRRGSMQWFSPEL 385
                +A +  T T+T  A+T+V    + A   + G+  W S E+
Sbjct: 156 SETTNMAHWIDTETQTLFANTLVDSRPRHAEFIKDGTELWVSAEI 200



 Score = 38.1 bits (87), Expect = 4e-07
 Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 52/217 (23%)

Query: 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163
           D I+VID+AT  V+ T         +T S D   +Y+  + +    V V+D  TG ++  
Sbjct: 34  DTISVIDIATLEVVRTIETGERPRGITFSKDYSRVYICASDSD--TVQVMDPVTGEILHD 91

Query: 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223
           +   + P        + P+   LY+     +      ITT   ++         SRQ   
Sbjct: 92  LPSGEDPEQFV----LHPNDRHLYIANEDDA------ITTVVDTE---------SRQ--- 129

Query: 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVD----------V 273
                       V+A ID+G     +A+SPDG IA   S  ++    +D          +
Sbjct: 130 ------------VIAQIDVGIEPEGMAVSPDGKIAITTSETTNMAHWIDTETQTLFANTL 177

Query: 274 IDTRTHQI------TSSRAISEIGGLVTRVSVSGDAD 304
           +D+R          T     +EIGG ++  +V   ++
Sbjct: 178 VDSRPRHAEFIKDGTELWVSAEIGGTISVFNVEDQSE 214



 Score = 29.6 bits (65), Expect = 1e-04
 Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 14/173 (8%)

Query: 41  GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVST-V 99
           G+A+S DG + + T+  T+    + T+T +     T V+     A    +    +VS  +
Sbjct: 142 GMAVSPDGKIAITTSETTNMAHWIDTET-QTLFANTLVDSRPRHAEFIKDGTELWVSAEI 200

Query: 100 SSAYDAIAVIDVATNT-----VLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLD 154
                   V D +  T     V G HP  +       +  + + YV+   +    VAV++
Sbjct: 201 GGTISVFNVEDQSEITKISFEVDGVHPDRVQPVGFEFTEGETHAYVALGPSN--HVAVVN 258

Query: 155 TTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQS 207
             T  + D + V    G     +  SPD S+++   NG SG + V+   + ++
Sbjct: 259 AETYEVEDYILV----GRRVWHMDFSPDRSLVFT-TNGVSGDVTVIDVAKREA 306