Pairwise Alignments

Query, 264 a.a., Probable deoxyribonuclease TatD (YJJV protein) from Mycobacterium tuberculosis H37Rv

Subject, 255 a.a., YchF/TatD family DNA exonuclease from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (375), Expect = 7e-41
 Identities = 93/259 (35%), Positives = 141/259 (54%), Gaps = 11/259 (4%)

Query: 2   VDAHTHLDACGARDADT-VRSLVERAAAAGVTAVVTVADDLESARWVTRAAEWDRRVYAA 60
           VD+H HLD    +D    V  ++++A  A V  +++V   L+S   +    E   +VYA+
Sbjct: 3   VDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVYAS 62

Query: 61  VALHPTRADALTDAARAELERLVAHPRVVAVGETGIDM-YWPGRLDGCAEPHVQREAFAW 119
             +HP   D  +D +     +   HPRVVA+GETG+D  Y P   D      +Q+  F  
Sbjct: 63  CGVHPL--DVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETAD------LQKLRFRQ 114

Query: 120 HIDLAKRTGKPLMIHNRQADRDVLDVLRAEGAPDTV-ILHCFSSDAAMARTCVDAGWLLS 178
            I+ A    KPL+IH R A +D L +LR   A     ++HCF+ D A A+  ++ G+ +S
Sbjct: 115 QIETAVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYIS 174

Query: 179 LSGTVSFRTARELREAVPLMPVEQLLVETDAPYLTPHPHRGLANEPYCLPYTVRALAELV 238
           +SG V+FR A +L+E V  +P+++LL+ETD+PYL P PHRG  N+P  +      +A L 
Sbjct: 175 ISGIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALK 234

Query: 239 NRRPEEVALITTSNARRAY 257
                EVA  TT N +  +
Sbjct: 235 GVSLTEVAQKTTQNFQNLF 253