Pairwise Alignments

Query, 439 a.a., Conserved hypothetical protein from Mycobacterium tuberculosis H37Rv

Subject, 416 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  258 bits (659), Expect = 2e-73
 Identities = 156/423 (36%), Positives = 230/423 (54%), Gaps = 16/423 (3%)

Query: 7   RSVAVVGSGVAGLTAAYILSGRDRVTLYEADGRLGGHAHTHYLDNGGGPRGTDVVGVDSA 66
           +++A+VG+G++GLT A++LS  ++VT++EA+  +GGH  T  +D  G         +D+ 
Sbjct: 2   KNIAIVGTGISGLTCAHLLSQANKVTVFEANDYIGGHTATVDVDYQG-----KTYAIDTG 56

Query: 67  FLVHNDRTYPTLCRLFAELGVATQESEMSMSVRADDIGLEYAGALGARGLFACRQSLRPR 126
           F+V NDRTYP   RL A L V+   +EMS SV     GLEY G   A      R  L PR
Sbjct: 57  FIVFNDRTYPLFERLLARLNVSILPTEMSFSVHNVLTGLEYNGHHFASLFAQKRNLLNPR 116

Query: 127 YLCMLAEILRFHRAAARLLREETDNAEDKPET-LEAFLSRHHFSQYFVDYFITPLVAAVW 185
           +   L EI+RF+++   + +++       P+T L  FL R  FS +F +++I P+ AA+W
Sbjct: 117 FWAFLNEIVRFNKSCKAIYQQD-----QYPDTNLGNFLDRERFSAFFAEHYILPMGAAIW 171

Query: 186 SCGGADALRYPARYLFVFLDHHGMLSVFGSPTWRTVTGGSANYV-QAIAAQLDEVSTRTP 244
           S    D   +  R+   F +HHG+L+V   P W  + GGS +Y+   IA   D +   +P
Sbjct: 172 SSSIEDMRAFSLRFFIRFFEHHGLLNVTDRPQWYVLKGGSRSYIPDLIAPFKDNLHLNSP 231

Query: 245 VHSLRRLPDGVLVGAGDGPSRRFDAAVVAVHPDQALLLLDEPTPAERAVLGAIAYSTNSA 304
           V S+ R  D V +   +G    FD  ++A H DQAL +L + T AE+A+LG + Y  N  
Sbjct: 232 VSSIERHEDCVKL-CVNGQWYEFDEVILACHSDQALGMLTDATSAEKAILGDLQYQNNEV 290

Query: 305 QLHTDESVLPRHHRARASWNY-LVTPGQHQVVVSYDISRLMRLDG-GRRYLVTLGGHDRV 362
            LHTD  +LP+   A ASWNY L    +    V+Y+++ L RL      + VTL   + +
Sbjct: 291 VLHTDTRILPKRKAAWASWNYRLDGDKKRPASVTYNMNILQRLPADAPTFCVTLNQSELI 350

Query: 363 DPSSVIAEMTYSHPLYTPESVAAQ-RLLPTLGDNRVVFAGAYHGWGFHEDGAASGLRAAR 421
           D S ++    Y+HP++   S+ AQ R     G NR  FAGAY   GFHEDG  S +    
Sbjct: 351 DESKILRRFNYAHPVFNERSLLAQARREEISGQNRTHFAGAYWHNGFHEDGVRSAVEVCD 410

Query: 422 RLG 424
             G
Sbjct: 411 HFG 413