Pairwise Alignments

Query, 848 a.a., Probable endopeptidase ATP binding protein (chain B) ClpB (ClpB protein) (heat shock protein F84.1) from Mycobacterium tuberculosis H37Rv

Subject, 862 a.a., endopeptidase Clp ATP-binding chain B (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  860 bits (2222), Expect = 0.0
 Identities = 443/858 (51%), Positives = 614/858 (71%), Gaps = 27/858 (3%)

Query: 5   NPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAET 64
           N T K+Q A+  A+    + G   I PAH+L  ++   + +   + + +G+    V    
Sbjct: 5   NFTIKSQEAVQEAVNLVQSRGQQAIEPAHILHGVMKVGENVTNFIFQKLGMNGQQVALVV 64

Query: 65  QRLLDRLPQATGASTQPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAK 124
            + ++ LP+ +G   +P LSRES   +  A Q + E+ DE+VS EH+++ L T  S V+ 
Sbjct: 65  DKQIESLPKVSGG--EPYLSRESNEVLQKATQYSKEMGDEFVSLEHILLALLTVKSTVST 122

Query: 125 LLTGHGASPQALREAFVKVRGSARVTSPEPEATYQALQKYSTDLTARAREGKLDPVIGRD 184
           +L   G + + LR A  ++R   +VTS   E  YQ+L+KY+ +L   AR GKLDPVIGRD
Sbjct: 123 ILKDAGMTEKELRNAINELRKGEKVTSQSSEDNYQSLEKYAINLNEAARSGKLDPVIGRD 182

Query: 185 NEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKTIVALDLGS 244
            EIRRV+Q+LSRRTKNNP+LIGEPG GKTAIVEGLA RI+ GDVPE+L++K + +LD+G+
Sbjct: 183 EEIRRVLQILSRRTKNNPILIGEPGTGKTAIVEGLAHRILRGDVPENLKNKQVYSLDMGA 242

Query: 245 MVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPML 304
           +VAG+KY+GEFEERLK+V++++K S G II FIDE+HT+VGAG  GEGAMDA N++KP L
Sbjct: 243 LVAGAKYKGEFEERLKSVVNEVKKSEGDIILFIDEIHTLVGAGK-GEGAMDAANILKPAL 301

Query: 305 ARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGV 364
           ARGELR +GATTLDEY+K+ EKD ALERRFQ V V EP    TI ILRGLK+RYE HH V
Sbjct: 302 ARGELRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTISILRGLKERYENHHHV 361

Query: 365 RITDSALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPVEIDEVERLVRRLE 424
           RI D A++AA  LS RYIT RFLPDKAIDL+DEAA++LRME+DS P E+DE+ R +++LE
Sbjct: 362 RIKDDAIIAAVELSSRYITDRFLPDKAIDLMDEAAAKLRMEVDSVPEELDEISRKIKQLE 421

Query: 425 IEEMALSKEEDEASAERLAKLRSELADQKEKLAELTTRWQNEKNAIEIVRDLKEQLEALR 484
           IE  A+ +E D+   E + K   ELA+ KE       +WQ+EK  ++ ++  K ++E L+
Sbjct: 422 IEREAIKRENDKPKLEIIGK---ELAELKEVEKSFKAKWQSEKTLMDKIQQNKVEIENLK 478

Query: 485 GESERAERDGDLAKAAELRYGRIPEVEKKLDAALPQAQARE--QVMLKEEVGPDDIADVV 542
            E+E+AER+GD  K AE+RYG++  ++K+++    + +  +  + M+KEEV  +DIADVV
Sbjct: 479 FEAEKAEREGDYGKVAEIRYGKLQALDKEIEDTQEKLRGMQGDKAMIKEEVDAEDIADVV 538

Query: 543 SAWTGIPAGRLLEGETAKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGA 602
           S WTGIP  ++++ E  KLL +EDEL +RVIGQ  A+ AV+DAVRRSRAG+ DP RP G+
Sbjct: 539 SRWTGIPVSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDPKRPIGS 598

Query: 603 FMFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGG 662
           F+FLG TGVGKTELAKALA+FLFDDE  M RIDMSEY EKH+V+RL+GAPPGYVGY+ GG
Sbjct: 599 FIFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRLVGAPPGYVGYDEGG 658

Query: 663 QLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDEGRLTDGHGRTVDFRNTILILTSNL 722
           QLTEA+RR+PY+VVLFDEIEKAHPDVF++LLQVLD+GRLTD  GR V+F+NTI+I+TSN+
Sbjct: 659 QLTEAIRRKPYSVVLFDEIEKAHPDVFNILLQVLDDGRLTDNKGRVVNFKNTIIIMTSNM 718

Query: 723 G-----------SGGSAEQVLA--------AVRATFKPEFINRLDDVLIFEGLNPEELVR 763
           G           SG + E+V+          ++   +PEF+NR+D+ ++F  L   E+ +
Sbjct: 719 GSSYIQSQMEKLSGSNKEEVIEETKKEVMNMLKKNIRPEFLNRIDETIMFLPLTETEIRQ 778

Query: 764 IVDIQLAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKML 823
           IV +Q+  + K LA+  ++L+++  A  +L+Q G+DP +GARP++R +Q+ + + L+K L
Sbjct: 779 IVLLQIKGVQKMLAENGVELEMTDAALNFLSQVGYDPEFGARPVKRAIQRYLLNDLSKKL 838

Query: 824 LAGQVHDGDTVPVNVSPD 841
           L+ +V     + V+ + D
Sbjct: 839 LSQEVDRSKAIIVDSNGD 856