Pairwise Alignments

Query, 966 a.a., Probable conserved transmembrane transport protein MmpL11 from Mycobacterium tuberculosis H37Rv

Subject, 388 a.a., MMPL family transporter from Methanococcus maripaludis JJ

 Score = 55.8 bits (133), Expect = 5e-12
 Identities = 64/285 (22%), Positives = 117/285 (41%), Gaps = 21/285 (7%)

Query: 52  VHDQLDAHYPDRGAPALALVAAPRPDA--SYQD--IDNAVALLRQIASELPGVTEAPNPT 107
           V D +D    D G+  +    + R D   +Y +  I N +A ++ I   LP        +
Sbjct: 95  VLDLVDFLEQDIGSMDMITSVSSRADVLKAYNNDVIPNDIATVKTIYQNLP-------ES 147

Query: 108 QRPPQPDRPYVVSLRLDARNAGTSDVAKKLRDRIGVKGDQSGQTANGKVRLYVIGQGALS 167
            R    +  Y + +     +AGT D    ++D I  + D++       V +   G  ALS
Sbjct: 148 SRDGIFNNDYSMVVVYATTDAGTDDKKILVKD-INSRLDEAPIPPG--VEVITTGTPALS 204

Query: 168 AAAAANTKHDIANAERWNLPIILMVLVAVFGSLAAAAIPLALAVCTVVITMG--LVFVLS 225
                      A     +L  I  +L+  F ++  + +PL   V  V+   G   +F + 
Sbjct: 205 ELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPLIPVVVAVIWAAGSMAIFKIP 264

Query: 226 MHTTMSVFVTSTVSMFGIALAVDYSLFILMRYREELRCGRRPPDAVDAAMATSGLAVVLS 285
           M T      TS +    + L +DY + +  RY EEL  G+   +A++ A+ ++G AV+++
Sbjct: 265 MDTA-----TSVMGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVVSTGSAVLVT 319

Query: 286 GMTVIASLTGIYLINTPALRSMATGAILAVAVAMLTSATLTPAVL 330
             T +A    + +     + +M     L +   M     L P ++
Sbjct: 320 TATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLLPPLI 364