Pairwise Alignments

Query, 1194 a.a., Probable transmembrane multidrug efflux pump from Mycobacterium tuberculosis H37Rv

Subject, 589 a.a., antibiotic ABC transporter ATP-binding protein from Pedobacter sp. GW460-11-11-14-LB5

 Score =  296 bits (757), Expect = 4e-84
 Identities = 167/560 (29%), Positives = 306/560 (54%), Gaps = 6/560 (1%)

Query: 620  LREFRGPLALSLLLVAVQTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIRW 679
            ++ +R     S++L  +      + P LI++ +D  I     S L    +     ++++ 
Sbjct: 20   VKPYRAVFVWSVILTILLAAISPVRPFLIKYTLDHYILAGNYSGLVNMTMLMVFMLILQT 79

Query: 680  VVQWGSAMVAGYTGEQVLFRLRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFL 739
            ++Q+   ++    G+ V+  LR  VF H  +L L  F+     Q++T   +D+E I    
Sbjct: 80   LIQYNHTLLTNTLGQSVIRDLRINVFNHITKLRLKFFDKTPIGQLITRTVSDLETIADIF 139

Query: 740  RTGLVVAVISVVTLVGILVALLAIRARLVLLIFTTMPVLALATWQFRRASNWTYRRARHR 799
              GL+  +   + +V I+  +L    +L L++   +P+L +AT +F++A    ++  R+ 
Sbjct: 140  SEGLISMIGDSLQVVVIVCVMLYTDWQLSLVVLLPIPLLIMATRKFQQAIKVAFQEIRNE 199

Query: 800  LGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSDDYRRLGVRGQRLLALYYPFVALLC 859
            +  +   L+E+  G+ I Q F  E +  + ++A +  YR   +R     ++++P V L+ 
Sbjct: 200  VSNLNTFLQEHITGVSIVQYFAREKQEYRKFYAINKRYRDANIRSNWYYSIFFPVVELIS 259

Query: 860  SLATTLVLLDGAREVRAGVISV--GALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGR 917
            +++  L++  GA+ + +  + V  G +  +++Y+ +++TPI +LA  F+  Q   V A R
Sbjct: 260  AMSLGLLVWYGAKSILSKPLDVTPGTITQFIMYLGMVFTPIRQLADKFNTLQMGMVGAER 319

Query: 918  IRSLLST--RTPSSPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFV 975
            +  +L T   TP+    RP   L G + F+ V ++Y       L  ++  + AG+TV  V
Sbjct: 320  VFKVLDTDETTPNEGTQRPA-KLEGNIKFEKVWFAYNDENY-VLKDLSFEVKAGETVALV 377

Query: 976  GSTGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRD 1035
            G+TG+GKS+ I ++ RFY+   G + VDG  + +FD+D  R+ +  V Q+ ++F+ T+ +
Sbjct: 378  GATGAGKSSTINILNRFYEVKKGDITVDGIRIEDFDLDYLRSHIATVLQDVFLFSDTILN 437

Query: 1036 AIAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARL 1095
             I    P+ T A+V  AA++VGAH  I  L   Y + V   G  LSAGQ QL++  RA +
Sbjct: 438  NITLNNPEITIAEVVNAAKKVGAHDFIERLPGAYQYNVMERGATLSAGQAQLISFIRALV 497

Query: 1096 VDPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTV 1155
             +P IL+LDEAT ++D  TE ++Q+A   L   RT++++AH L+  + AD+I+VL+ G +
Sbjct: 498  HNPAILVLDEATSSVDTETELLIQKAIDNLMEGRTSIVIAHRLSTIQKADQIIVLDKGEI 557

Query: 1156 VEDGAHTELLAAGGHYSRLW 1175
             E G H +LL   G+Y +L+
Sbjct: 558  KEKGTHQQLLKLNGYYKKLY 577



 Score =  230 bits (587), Expect = 2e-64
 Identities = 152/562 (27%), Positives = 281/562 (50%), Gaps = 4/562 (0%)

Query: 8   RLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVIDDAI-AADHRPLAPWAVVLVAA 66
           R+  YV  +R   +      +    I+ + P + K  +D  I A ++  L    +++V  
Sbjct: 15  RIFQYVKPYRAVFVWSVILTILLAAISPVRPFLIKYTLDHYILAGNYSGLVNMTMLMVFM 74

Query: 67  AGATYLLMYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQL 126
                L+ Y        +   V  DLR++ F  + +   +  D+   GQLI RT +DL+ 
Sbjct: 75  LILQTLIQYNHTLLTNTLGQSVIRDLRINVFNHITKLRLKFFDKTPIGQLITRTVSDLET 134

Query: 127 VQALLFD-VPNVLRHVLTLLLGVAVMTWLSVPLALLAVLLVPVIGLIAHRSRRLLAAATH 185
           +  +  + + +++   L +++ V VM +    L+L+ +L +P++ +   + ++ +  A  
Sbjct: 135 IADIFSEGLISMIGDSLQVVVIVCVMLYTDWQLSLVVLLPIPLLIMATRKFQQAIKVAFQ 194

Query: 186 CAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVTASRALYAAQLRVARLNAHFGPL 245
             +   + +   +   + G+ +V+ F +E++E  K    ++    A +R     + F P+
Sbjct: 195 EIRNEVSNLNTFLQEHITGVSIVQYFAREKQEYRKFYAINKRYRDANIRSNWYYSIFFPV 254

Query: 246 LQTLPA--LGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQAR 303
           ++ + A  LG +  +     ++    +T GT   F   L ++  P   LA      Q   
Sbjct: 255 VELISAMSLGLLVWYGAKSILSKPLDVTPGTITQFIMYLGMVFTPIRQLADKFNTLQMGM 314

Query: 304 AGAVRVLELIDSRPTLVDGTKPLSPEARLSLEFQRVSFGYVADRPVLREISLSVRAGETL 363
            GA RV +++D+  T  +       +   +++F++V F Y  +  VL+++S  V+AGET+
Sbjct: 315 VGAERVFKVLDTDETTPNEGTQRPAKLEGNIKFEKVWFAYNDENYVLKDLSFEVKAGETV 374

Query: 364 AVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGT 423
           A+VGA G+GKS+  ++  R Y+V +G + + G  + +  LD LRS I  V +D  LFS T
Sbjct: 375 ALVGATGAGKSSTINILNRFYEVKKGDITVDGIRIEDFDLDYLRSHIATVLQDVFLFSDT 434

Query: 424 IGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALAR 483
           I  NI    P+ T  ++  AA+     +F+  LP  YQ  V  RG TLS GQ Q I+  R
Sbjct: 435 ILNNITLNNPEITIAEVVNAAKKVGAHDFIERLPGAYQYNVMERGATLSAGQAQLISFIR 494

Query: 484 ALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDS 543
           AL+H P +L++D+ TS+VD   E  IQ+ +   +  RT+++   R S +  AD++ VLD 
Sbjct: 495 ALVHNPAILVLDEATSSVDTETELLIQKAIDNLMEGRTSIVIAHRLSTIQKADQIIVLDK 554

Query: 544 GRLLDVGTPDEVWERCPRYREL 565
           G + + GT  ++ +    Y++L
Sbjct: 555 GEIKEKGTHQQLLKLNGYYKKL 576