Pairwise Alignments

Query, 838 a.a., DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

Subject, 894 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Vibrio cholerae E7946 ATCC 55056

 Score =  741 bits (1914), Expect = 0.0
 Identities = 392/865 (45%), Positives = 554/865 (64%), Gaps = 62/865 (7%)

Query: 10  DSLDRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRS 69
           D    I PV+IE E++ SY+DYAMSVIVGRALP+VRDGLKPVHRRVL+AM   G   +++
Sbjct: 3   DLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWNKA 62

Query: 70  HAKSARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRY 129
           + KSAR V + +G YHPHGD+++YD++VRMAQP+SLRY LVDGQGNFGS   D  AAMRY
Sbjct: 63  YKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRY 122

Query: 130 TEARLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNI 189
           TE R++ +A E+L ++D+ETVD++PNYDG  Q P VLP++ PNLL NG+ GIAVGMATNI
Sbjct: 123 TEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGASGIAVGMATNI 182

Query: 190 PPHNLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRG 249
           PPHNL E+ D     ++N    E  T+  +M  + GPDFPTA LI G +G  DAYKTGRG
Sbjct: 183 PPHNLGEVIDGCLAYIDN----EAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRG 238

Query: 250 SIRMRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDR 309
            + MR   E+E D  G+ +++++E+PYQVN    I  IAE V++ K+ GIS + D+S D+
Sbjct: 239 KVYMRSKAEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDES-DK 297

Query: 310 VGLRIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQ 369
            G+RIVIE KRDAV +VV+NNLY +TQLQT+FG NM+A+ +G P+   L ++++ +VDH+
Sbjct: 298 DGMRIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHR 357

Query: 370 LDVIVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLI------- 422
            +V+ RRT + LRKA ERAHIL GL  AL  +DE+I LIR + T   A+ GLI       
Sbjct: 358 REVVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAATPAEAKEGLIARGWDLG 417

Query: 423 ----------------ELLD-----------IDEIQAQAILDMQLRRLAALERQRIIDDL 455
                           E L+           + E QAQAILD++L +L  LE ++I+D+ 
Sbjct: 418 NVAAMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEY 477

Query: 456 AKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAADGDVSDEDLIARED 515
            ++  EIA L  ILA  ER   ++R+EL  I     D RRT I AA  D+  E+LIARED
Sbjct: 478 KQLLEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIARED 537

Query: 516 VVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGR 575
           VVVT++  GY K      Y +Q+RGGKG     +K++D +    V +THD IL F+T+G+
Sbjct: 538 VVVTLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGK 597

Query: 576 VYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKS 635
            YR K Y LP ASRTARG+ + NLL  +  ERI  ++ +  +++  ++ +AT +G VKK+
Sbjct: 598 TYRMKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKT 657

Query: 636 KLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDE------- 688
            L  F + R+ G++A+NLRD D L+G  +     +++L S  G+ +RF  ++E       
Sbjct: 658 SLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDEN 717

Query: 689 ----------------ALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYA 732
                            +RPMGR  +GV+GM+    D+++SL V +    +L  T  GY 
Sbjct: 718 GQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTEGDVLTVTENGYG 777

Query: 733 KRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQVR 792
           KRT++ EYP +GRG +GV+++    R G +VGA+ V +  E   +T+ G ++RT   +V 
Sbjct: 778 KRTSLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVS 837

Query: 793 KAGRQTKGVRLMNLGEGDTLLAIAR 817
           + GR T+GV L+   EG++++ + R
Sbjct: 838 QVGRNTQGVTLIRTSEGESVVGLQR 862