Pairwise Alignments

Query, 838 a.a., DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

Subject, 925 a.a., DNA gyrase subunit A from Pseudomonas syringae pv. syringae B728a

 Score =  686 bits (1769), Expect = 0.0
 Identities = 384/883 (43%), Positives = 536/883 (60%), Gaps = 82/883 (9%)

Query: 15  IEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAKSA 74
           I PV+IE E+++SY+DYAMSVIVGRALP+ RDGLKPVHRRVL+AM + G   ++ + KSA
Sbjct: 8   ILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMSELGNDWNKPYKKSA 67

Query: 75  RSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEARL 134
           R V + +G YHPHGD ++YD++VRMAQP+SLRY LVDGQGNFGS   D  AAMRYTE R+
Sbjct: 68  RVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYLLVDGQGNFGSVDGDNAAAMRYTEVRM 127

Query: 135 TPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPHNL 194
           T LA E+L ++ +ETVD++PNYDG    P V+P+R PNLL NGS GIAVGMATNIPPHNL
Sbjct: 128 TKLAHELLADLHKETVDWVPNYDGTEMIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNL 187

Query: 195 RELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSI--R 252
            E+ D     ++N     E T+  +M  + GPDFPTA +I G  G  +AY+TGRG I  R
Sbjct: 188 GEVIDGCLALIDN----PELTVDELMQYIPGPDFPTAAIINGRAGIIEAYRTGRGRIYMR 243

Query: 253 MRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGL 312
            R +VE  +   GR  +VITELPYQ+N    I  IAE V++ KL GI+ + D+ SD+ G+
Sbjct: 244 ARSIVEDIDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDE-SDKDGM 302

Query: 313 RIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQLDV 372
           R+VIE++R  V +V++NNLY  TQLQ+ FG N++A++DG PR L L  L+  +V H+ +V
Sbjct: 303 RVVIELRRGEVPEVILNNLYAQTQLQSVFGINIVALIDGRPRILNLKDLLEAFVRHRREV 362

Query: 373 IVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLI---------- 422
           + RRT + LRKA ER HIL G   AL  +D VIALI+AS T   A+  LI          
Sbjct: 363 VTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKASPTPAEAKEALIKTPWESSAVV 422

Query: 423 -------------ELLD-----------IDEIQAQAILDMQLRRLAALERQRIIDDLAKI 458
                        E LD           +   QAQAIL+++L RL  LE ++++ +  +I
Sbjct: 423 EMVERAGADSCRPENLDPQYGLREGKYFLSPEQAQAILELRLHRLTGLEHEKLLGEYQEI 482

Query: 459 EAEIADLEDILAKPERQRGIVRDELAEIVDRHGDDRRTRIIAADGDVSDEDLIAREDVVV 518
             +I +L  IL    R   ++R+EL  I   +GD RRT I+ A  D++  DLI  E+ VV
Sbjct: 483 LNQIGELIRILNSATRLMEVIREELELIRSEYGDARRTEILDARLDLTLGDLITEEERVV 542

Query: 519 TITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYR 578
           TI+  GYAK     +Y++Q+RGGKG    G+K +D +AH  V ++H  +L F+++G+VY 
Sbjct: 543 TISHGGYAKTQPLAVYQAQRRGGKGKSATGIKDEDYIAHLLVANSHTTLLMFSSKGKVYW 602

Query: 579 AKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQI----------------RGYTD--- 619
            K Y++PEASR ARG+ + NLL     E I  ++ +                 G  D   
Sbjct: 603 LKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEGEALEGELDDAE 662

Query: 620 --------------------APYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDEL 659
                               AP++ ++T NG VKK+ L  F   RS G++A+ L + D L
Sbjct: 663 NSSETEEERKARIKAADKKKAPFIFMSTANGTVKKTPLVAFSRQRSSGLIALELDEGDIL 722

Query: 660 VGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVRE 719
           + A +     +++L S  G+  RF  +D  +R MGR   GV+GMR     +L+S+ +  E
Sbjct: 723 ISAAITDGEQEIMLFSDGGKVTRFKESD--VRAMGRTARGVRGMRLPEGQKLISMLIPEE 780

Query: 720 GTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTS 779
           G+ +L A+  GY KRTAI E+P   RGG+GV+ ++ + R GRLVGA+ V D  E+  ++ 
Sbjct: 781 GSQILTASERGYGKRTAISEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLISD 840

Query: 780 GGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEES 822
            G ++RT   +V   GR T+GV L+ L   + L+ + R  E S
Sbjct: 841 QGTLVRTRVGEVSSLGRNTQGVTLIKLASDEKLVGLERVQEPS 883



 Score = 38.1 bits (87), Expect = 2e-06
 Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 12/121 (9%)

Query: 715 NVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSEL 774
           +++ E   ++  + GGYAK   +  Y  Q RGGKG  +    +    +   L+ +  + L
Sbjct: 533 DLITEEERVVTISHGGYAKTQPLAVYQAQRRGGKG-KSATGIKDEDYIAHLLVANSHTTL 591

Query: 775 YAVTSGGGVIRTAARQVRKAGRQTKG---VRLMNLGEGD--------TLLAIARNAEESG 823
              +S G V      ++ +A R  +G   V L+ L +G+         L A+ + A+E G
Sbjct: 592 LMFSSKGKVYWLKTYEIPEASRAARGRPLVNLLPLSDGEYITTMLPVDLEAMRKRADEEG 651

Query: 824 D 824
           +
Sbjct: 652 E 652