Pairwise Alignments

Query, 838 a.a., DNA gyrase (subunit A) GyrA (DNA topoisomerase (ATP-hydrolysing)) (DNA topoisomerase II) (type II DNA topoisomerase) from Mycobacterium tuberculosis H37Rv

Subject, 858 a.a., DNA gyrase subunit A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  696 bits (1795), Expect = 0.0
 Identities = 365/834 (43%), Positives = 545/834 (65%), Gaps = 19/834 (2%)

Query: 13  DRIEPVDIEQEMQRSYIDYAMSVIVGRALPEVRDGLKPVHRRVLYAMFDSGFRPDRSHAK 72
           DRI  ++IE+EM+ SYIDY+MSVIV RALP+VRDG KPVHRR+LY M + G   D+ + K
Sbjct: 5   DRIIKINIEEEMKSSYIDYSMSVIVSRALPDVRDGFKPVHRRILYGMMELGNTSDKPYKK 64

Query: 73  SARSVAETMGNYHPHGDASIYDSLVRMAQPWSLRYPLVDGQGNFGSPGNDPPAAMRYTEA 132
           SAR V E +G YHPHGD+S+Y ++VRMAQ W++RYPLVDGQGNFGS   D PAAMRYTEA
Sbjct: 65  SARIVGEVLGKYHPHGDSSVYYAMVRMAQEWAMRYPLVDGQGNFGSVDGDSPAAMRYTEA 124

Query: 133 RLTPLAMEMLREIDEETVDFIPNYDGRVQEPTVLPSRFPNLLANGSGGIAVGMATNIPPH 192
           RL  L   M+ ++ +ETVDF PN+D  + EP V+P+R PNLL NG+ GIAVGMATN+PPH
Sbjct: 125 RLNKLGEAMMDDLYKETVDFEPNFDNTLTEPKVMPTRIPNLLVNGASGIAVGMATNMPPH 184

Query: 193 NLRELADAVFWALENHDADEEETLAAVMGRVKGPDFPTAGLIVGSQGTADAYKTGRGSIR 252
           NL E+ DA    ++N +   EE    +M  VK PDFPT G I G  G  + Y TGRG + 
Sbjct: 185 NLSEVIDACEAYIDNQEITVEE----LMTYVKAPDFPTGGYIYGISGVREGYLTGRGRVV 240

Query: 253 MRGVVEVEEDSRGRTSLVITELPYQVNHDNFITSIAEQVRDGKLAGISNIEDQSSDRVGL 312
           MR   E+E   +    +V+TE+PY VN    I  IA+ V D ++ GISN  D+S DR G+
Sbjct: 241 MRAKAEIET-GQTHDKIVVTEIPYNVNKAELIKYIADLVNDKRIEGISNANDES-DRDGM 298

Query: 313 RIVIEIKRDAVAKVVINNLYKHTQLQTSFGANMLAIVDGVPRTLRLDQLIRYYVDHQLDV 372
           RIVI++KRDA A VV+N LYK T LQTSFG N +A+V G P+TL L  +I+Y+V+H+ +V
Sbjct: 299 RIVIDVKRDANASVVLNKLYKMTALQTSFGVNNVALVHGRPKTLNLRDMIKYFVEHRHEV 358

Query: 373 IVRRTTYRLRKANERAHILRGLVKALDALDEVIALIRASETVDIARAGLIELLDIDEIQA 432
           ++RRT + LRKA ERAHIL GL+ A D +DEVI +IRA++T + A AGLIE  ++ EIQ+
Sbjct: 359 VIRRTQFDLRKAKERAHILEGLIIASDNIDEVIRIIRAAKTPNDAIAGLIERFNLTEIQS 418

Query: 433 QAILDMQLRRLAALERQRIIDDLAKIEAEIADLEDILAKPERQRGIVRDELAEIVDRHGD 492
           +AI++M+LR+L  L + ++  +  +I  +IA LE ILA  E  R +++DEL E+  ++GD
Sbjct: 419 RAIVEMRLRQLTGLMQDQLHAEYEEIMKQIAYLESILADDEVCRKVMKDELLEVKAKYGD 478

Query: 493 DRRTRIIAADGDVSDEDLIAREDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQD 552
           +RR+ I+ +  + + ED  A + +++TI+  GY KRT    +R+Q RGG G +G   +  
Sbjct: 479 ERRSEIVYSSEEFNPEDFYADDQMIITISHMGYIKRTPLTEFRAQNRGGVGSKGTETRDA 538

Query: 553 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVI 612
           D V H +  + H+ ++FFT +G+ Y  K Y++PE ++ ++G+ + NLL    ++ +   +
Sbjct: 539 DFVEHIYPATMHNTMMFFTQKGKCYWLKVYEIPEGTKNSKGRAIQNLLNIDSDDSVTAYL 598

Query: 613 QIRG-----YTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSA 667
           +++      Y ++ Y++  T+ G++KK+ L  +   R  G+ A+ +R++D ++   + + 
Sbjct: 599 RVKSLDDTEYINSHYVLFCTKKGVIKKTLLEQYSRPRQNGVNAITIREDDSVIEVRMTNG 658

Query: 668 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNID--DRLLSLNVVR--EGTYL 723
            +++++ + NG++IRF   + A+R MGR  +GV+G+  + D  D ++ +  ++  E   +
Sbjct: 659 NNEIIIANRNGRAIRFH--EAAVRVMGRTATGVRGITLDNDGQDEVIGMICIKDLETESV 716

Query: 724 LVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGV 783
           +V +  GY KR+ IE+Y    RGGKGV T+    + G+LV    V D+++L  +   G  
Sbjct: 717 MVVSEQGYGKRSEIEDYRKTNRGGKGVKTMNITEKTGKLVTIKSVTDENDLMIINKSGIT 776

Query: 784 IRTAARQVRKAGRQTKGVRLMNLGE-GDTLLAIARNAEESGDDNAVDANGADQT 836
           IR     VR  GR T+GVRL+NL +  D + ++ +   ES +D  V A  A+ T
Sbjct: 777 IRLKVADVRIMGRATQGVRLINLEKRNDQIGSVCKVMTESLEDE-VPAEEAEGT 829