Pairwise Alignments

Query, 243 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 265 a.a., 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) from Herbaspirillum seropedicae SmR1

 Score =  218 bits (555), Expect = 1e-61
 Identities = 115/248 (46%), Positives = 154/248 (62%), Gaps = 11/248 (4%)

Query: 1   MILFPAVDIKDGRCVRLRQGRADAETVFSDDPAAMARHWQDQGAKWLHVIDLDGAFSGMP 60
           M+L PA+D+KDG CVRL+QG  D  TVFS+DPA MA HW  QGA+ LH++DL+GAF+G P
Sbjct: 1   MLLIPAIDLKDGHCVRLKQGDMDQATVFSEDPAEMALHWLKQGARRLHLVDLNGAFAGKP 60

Query: 61  ANFELIRRICADLS----------VPVQLGGGIRDEATAKAYLDAGVERLIIGTVALEEP 110
            N   ++ I   ++          +PVQLGGGIRD  T + YLD G+  +IIGT A++ P
Sbjct: 61  KNEAAVKAILKAVASFAEENEVEEIPVQLGGGIRDLDTIERYLDDGLSYIIIGTAAVKNP 120

Query: 111 DLYARLCATFPGRIGVSLDAEGGRLKTKGWVADSGLTVDDVLPRLLAAGTAFVIYTDIDR 170
                 C+ FPG+I V LDA+ G++ T GW   SG  V D+  +    G   ++YTDI R
Sbjct: 121 GFLHDACSAFPGQIIVGLDAKDGKVATDGWSKLSGHEVVDLAQKFEGYGCEAIVYTDIGR 180

Query: 171 DGMQTGVNLSALERLAGMCPVPVIAAGGVATLEDVRALYPMTLTSSVEGAITGRAIYTGT 230
           DGM  GVN+ A  RLA    +P+IA+GGV  + DV AL  +     +E  I GR+IY GT
Sbjct: 181 DGMMGGVNIEATVRLAQAVTIPIIASGGVHNVGDVEALCRVE-DEGIEAVICGRSIYEGT 239

Query: 231 LDLHAAME 238
           LDL +  +
Sbjct: 240 LDLRSGQD 247