Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 375 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase from Pseudomonas stutzeri RCH2

 Score =  198 bits (504), Expect = 2e-55
 Identities = 138/358 (38%), Positives = 187/358 (52%), Gaps = 18/358 (5%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPR--ADQPSGNPDPAEAIGAMCARL 59
           ++ V +SGG DS  + LLLLEQG  V GL  +        +  +   D A+A  A+C R+
Sbjct: 13  RVIVGMSGGVDSSVSALLLLEQGYQVEGLFMKNWEEDDGTEYCTAKEDLADA-QAVCDRI 71

Query: 60  GVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLDAARALGAARLAT 119
           G+  H  + A  + + V   F+ EY  GRTPNP   CN  +KF   LD A  LGA  +AT
Sbjct: 72  GIKLHTANFAAEYWDNVFEHFLAEYKAGRTPNPDILCNREIKFKAFLDYALMLGADLIAT 131

Query: 120 GHYVRQLRHPQWGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVKR 179
           GHYVR+ R       L +G DP KDQSYFL  V   +L + +FP+G   K  V+A   K 
Sbjct: 132 GHYVRR-RDRDGRSELLKGLDPNKDQSYFLHAVGGEQLGKTLFPVGELEKPAVRAIAEKY 190

Query: 180 NIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPGPGPIVTMRGRKIGSHKGLWQYTEGQR 239
           ++      +S  ICF+    +  FL  +Q     PG I T+ G  IG H GL  +T GQR
Sbjct: 191 DLATAKKKDSTGICFIGERRFSDFL--KQYLPAQPGNIETVDGEVIGRHHGLMYHTIGQR 248

Query: 240 RGLGI-----AWEEPLYVVSKDMENNVLLVG-GREH--LAARGCLTEDVNLLVDPAD--W 289
           +GLGI     A +EP YV+SKD++ N L+VG G +H  L +R  L  ++   V+P D   
Sbjct: 249 QGLGIGGLKDASDEPWYVLSKDLQRNALVVGQGNDHPWLFSRALLASEI-YWVNPIDLST 307

Query: 290 PAEISVRTRYRQAPQPARVTVGDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGGVI 347
           P +++ + RYRQ+ Q   +     G    F  PQ     GQ    YD E   L GGVI
Sbjct: 308 PLKLTAKVRYRQSDQACTLEKTAEGYRAVFEAPQRAVTPGQSVVFYDGE-ICLGGGVI 364