Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 372 a.a., tRNA 2-thiouridine(34) synthase MnmA from Vibrio cholerae E7946 ATCC 55056

 Score =  173 bits (438), Expect = 7e-48
 Identities = 129/362 (35%), Positives = 186/362 (51%), Gaps = 22/362 (6%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPRADQP--SGNPDPAEAIGAMCARL 59
           K+ V +SGG DS  +  LL +QG  V GL  +      ++   +   D A+A  A+C +L
Sbjct: 13  KVIVGMSGGVDSSVSAYLLKQQGYQVEGLFMKNWEEDDNEEYCTAAEDLADA-QAVCDKL 71

Query: 60  GVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLD-AARALGAARLA 118
           G+  H ++ A  + + V   F+ EY  GRTPNP   CN  +KF   L+ A   L A  +A
Sbjct: 72  GIPLHTINFAAEYWDNVFEYFLAEYKAGRTPNPDILCNKEIKFKAFLEFADEVLDADYIA 131

Query: 119 TGHYVRQLRHPQWGMTLQ--RGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAEL 176
            GHYVR+   PQ G   Q  RG D  KDQSYFL  +   ++ + +FP+G   K +V+   
Sbjct: 132 MGHYVRR-TFPQNGEKPQMLRGLDGNKDQSYFLYTLSHEQVARTLFPVGELEKPEVRRIA 190

Query: 177 VKRNIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPG-PGPIVTMRGRKIGSHKGLWQYT 235
            ++ ++     +S  ICF+    +  FL      LP  PG I T  G+ IG H+GL  +T
Sbjct: 191 EEQGLITAKKKDSTGICFIGERKFTDFL---SRYLPAQPGKIETPEGKVIGEHQGLMYHT 247

Query: 236 EGQRRGLGI-----AWEEPLYVVSKDMENNVLL-VGGREH--LAARGCLTEDVNLL-VDP 286
            GQR+GL I     + E+P YV  KD++ NVL+ V G +H  L + G +   ++ +   P
Sbjct: 248 LGQRKGLHIGGMKESSEQPWYVADKDLKRNVLIAVQGADHPLLKSHGLVAAQLHWVDRTP 307

Query: 287 ADWPAEISVRTRYRQAPQPAR-VTVGDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGG 345
              P   SV+TRYRQ+      + + D  + V F EPQ     GQ A  Y  E   L GG
Sbjct: 308 ITEPVRCSVKTRYRQSDIACTIIPLSDDRIKVMFDEPQVAVTPGQSAVFYQGE-ICLGGG 366

Query: 346 VI 347
           +I
Sbjct: 367 II 368