Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 398 a.a., tRNA-specific 2-thiouridylase MnmA from Sinorhizobium meliloti 1021

 Score =  199 bits (505), Expect = 1e-55
 Identities = 129/363 (35%), Positives = 178/363 (49%), Gaps = 18/363 (4%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPP-----RADQPSGNPDPAEAIGAMC 56
           ++ VA+SGG DS     LL  +G DV G+  +         RA       D  +A   +C
Sbjct: 14  RVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCCAGQDIDDA-RRVC 72

Query: 57  ARLGVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLDAARALGAAR 116
             +G+  + +D    F E V+ PF E Y+ G TP PC  CN T+KF  LL  A+ LGA  
Sbjct: 73  ETIGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFADLLATAKELGADA 132

Query: 117 LATGHYVRQLRHPQ----WGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQV 172
           LATGHY+R    P+        L R AD  +DQSYFL    + +++   FPLG   K + 
Sbjct: 133 LATGHYIRSRPSPKPRYAGQRALYRPADAERDQSYFLFATTQEQIDYLRFPLGGLPKSET 192

Query: 173 KAELVKRNIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPGPGPIVTMRGRKIGSHKGLW 232
           +A   +  +V    ++SQ+ICFVP   Y   +   +      G IV + GR +G+H+G+ 
Sbjct: 193 RALAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALAGEIVHLDGRVLGAHEGIL 252

Query: 233 QYTEGQRRGLGIAWEEPLYVVSKDMENNVLLVGGREHLAARGCLTEDVNLLVD-----PA 287
            YT GQRRG+G+A  EPLYVV  D  +  ++VG +E L  R     DVN L D      A
Sbjct: 253 HYTIGQRRGIGVATGEPLYVVYLDSRSRRVIVGPKEALETRRVYLRDVNWLGDEELEAAA 312

Query: 288 DWPAEISVRTRYRQAPQPARVTVGDTGMAVRFREPQTPPARGQVAAVYDAEG---HVLAG 344
               E   + R  + P PA +     G+ V   E +   A GQ  A+Y   G    V  G
Sbjct: 313 GQGFECFAKVRSTRRPAPAVLKSDAEGLYVELVEGEAGVAPGQACALYSGTGEDARVYGG 372

Query: 345 GVI 347
           G I
Sbjct: 373 GFI 375