Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 371 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (461), Expect = 2e-50
 Identities = 134/361 (37%), Positives = 189/361 (52%), Gaps = 22/361 (6%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHAR-FLPPRADQPSGNPDPAEAIGAMCARLG 60
           K+ V +SGG DS  +  LL++QG  V GL  + +     D+     +  +   A+C +LG
Sbjct: 12  KVIVGMSGGVDSSVSAYLLMQQGYQVEGLFMKNWEEDDTDEYCAAAEDLKDAQAVCDKLG 71

Query: 61  VDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLD-AARALGAARLAT 119
           +  H V+ A  + + V   F+ EY  GRTPNP   CN  +KF   L+ A   L A  +A 
Sbjct: 72  IKLHTVNFAAEYWDNVFEYFLAEYKAGRTPNPDIMCNKEIKFKAFLEFADDILDADYIAM 131

Query: 120 GHYVRQLRHPQWGMT-LQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVK 178
           GHYVR  R    G + + RG D  KDQSYFL  +   ++ +++FP+G   K +V+    +
Sbjct: 132 GHYVR--RSDASGQSQMLRGVDGNKDQSYFLYTLSHEQIARSLFPVGELEKSEVREIAKE 189

Query: 179 RNIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPG-PGPIVTMRGRKIGSHKGLWQYTEG 237
             +V     +S  ICF+    +  FLR     LP  PG I T  G  IG H+GL  +T G
Sbjct: 190 MGLVTHDKKDSTGICFIGERKFTDFLR---TFLPAQPGKIETAEGEVIGEHQGLMYHTLG 246

Query: 238 QRRGLGIAW-----EEPLYVVSKDMENNVLLVG-GREH--LAARGCLTEDVNLL--VDPA 287
           QR+GLGI       ++P YVV KD+E NVL+VG G +H  L + G   + ++ +    P 
Sbjct: 247 QRKGLGIGGMKNSNDDPWYVVDKDLERNVLVVGQGGKHPRLMSVGFYADQLHWVDRTGPN 306

Query: 288 DWPAEISVRTRYRQAPQPARVTV-GDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGGV 346
           D  A+I+V+TRYRQ      +T  GD  + V F EP      GQ A  YD E   L GG+
Sbjct: 307 D-GAKITVKTRYRQQDVACTLTYEGDDRIKVIFDEPVAAVTPGQSAVFYDGE-VCLGGGI 364

Query: 347 I 347
           I
Sbjct: 365 I 365