Pairwise Alignments

Query, 351 a.a., tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 368 a.a., tRNA 2-thiouridine(34) synthase MnmA from Klebsiella michiganensis M5al

 Score =  192 bits (488), Expect = 1e-53
 Identities = 135/360 (37%), Positives = 194/360 (53%), Gaps = 20/360 (5%)

Query: 2   KIAVALSGGTDSLFALLLLLEQGQDVFGLHARFLPPRADQP--SGNPDPAEAIGAMCARL 59
           K+ V +SGG DS  +  LLL+QG  V GL  +       +   +   D A+A  A+C +L
Sbjct: 7   KVIVGMSGGVDSSVSAYLLLQQGYKVEGLFMKNWEEDDGEEYCTAAADLADA-QAVCDKL 65

Query: 60  GVDFHAVDLADAFEEAVVAPFIEEYVVGRTPNPCARCNATMKFGLLLD-AARALGAARLA 118
           G++ H V+ A  + + V   F+EEY  GRTPNP   CN  +KF   L+ AA  LGA  +A
Sbjct: 66  GIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIA 125

Query: 119 TGHYVRQLRHPQWGMTLQRGADPAKDQSYFLSLVDRARLEQAVFPLGNWRKEQVKAELVK 178
           TGHYVR+         L RG D  KDQSYFL  +   ++ Q++FP+G   K QV+    +
Sbjct: 126 TGHYVRR-ADVNGKSQLLRGLDGNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEE 184

Query: 179 RNIVPPLPSESQEICFVPGDDYRAFLRDRQVRLPG-PGPIVTMRGRKIGSHKGLWQYTEG 237
            +++     +S  ICF+    +R FL      LP  PG I+++ G ++G H+GL  +T G
Sbjct: 185 LDLITAKKKDSTGICFIGERKFREFLGR---YLPAQPGKIISVDGDEVGEHQGLMYHTLG 241

Query: 238 QRRGLGI-----AWEEPLYVVSKDMENNVLLVG-GREH--LAARGCLTEDVNLL-VDPAD 288
           QR+GLGI       E+P YVV KD+ENN+L+V  G +H  L + G + + ++ +  +P  
Sbjct: 242 QRKGLGIGGIKDGGEDPWYVVDKDVENNILVVAQGHDHPRLMSVGLIAQQLHWVDREPVT 301

Query: 289 WPAEISVRTRYRQAPQPARV-TVGDTGMAVRFREPQTPPARGQVAAVYDAEGHVLAGGVI 347
                +V+TRYRQ   P  V  + D  + V F EP      GQ A  Y  E   L GG+I
Sbjct: 302 GTLRCTVKTRYRQTDIPCSVKALDDDRIEVIFDEPVAAVTPGQSAVFYRGE-VCLGGGII 360