Pairwise Alignments

Query, 631 a.a., diguanylate cyclase with hemerythrin-like metal-binding domain (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  132 bits (332), Expect = 5e-35
 Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 3/180 (1%)

Query: 302 NREMWEQKAMRDPLTGLFNRSRLDCALETELRRAQRSEDVLSLLMVDVDNFKSYNDIHGH 361
           N+++ EQ  + D LTG+ NR+  +  L+ E R ++R +  ++LLM+D+D+FK+ ND +GH
Sbjct: 446 NQKLTEQTTI-DSLTGVKNRAAFNKRLQAEGRISRRQQTPMALLMLDIDHFKNINDKYGH 504

Query: 362 VAGDTCLRAVAHTLRTVVHRAPDMVARYGGEEFACVLPGTAEAGAAQMAERIRCAVAELC 421
           +AGD  L+A+A TL   + R  D+V+R+GGEEFA +LP T   GA  +AE IR AV EL 
Sbjct: 505 LAGDYTLKAIADTLSAQLRRPTDLVSRFGGEEFAIILPSTDAEGAVAVAEHIREAVEELT 564

Query: 422 IVHPGNTPAGHVTVSVGVTTVRGGRNATPDQAIDMADRALYRAKSKGRNTVATAQDILPP 481
           I          +TVS+GV++     +  P Q ++ AD+ALY+AK  GRN V   QDI  P
Sbjct: 565 I--KWEQFMIPLTVSIGVSSNIIESDEHPLQLLEQADKALYQAKHDGRNRVGLFQDIPVP 622