Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  175 bits (443), Expect = 7e-48
 Identities = 102/268 (38%), Positives = 166/268 (61%), Gaps = 6/268 (2%)

Query: 405 RVSSASGELSEQVEEASSGADEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHE 464
           ++++A+ +LS   E+ S+G   Q+    + A+AM +M ++V EVA N   A+  A  A E
Sbjct: 412 QIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASE 471

Query: 465 QARQGSVVVEEAVACINRVAEQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLALN 524
           +A  GS VV+ A   I ++A + + L   M  L   +  +G +I VI+ +A+QTNLLALN
Sbjct: 472 RAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALN 531

Query: 525 AAIEAARAGDAGRGFAVVADEVRKLAEKTMQATREVVGFVEAIRTGVARSRSATDEAVRL 584
           AAIEAARAG+ GRGFAVVADEVR LA++T  +T E+   ++A++ G   +    D +++ 
Sbjct: 532 AAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQR 591

Query: 585 VAQSTGLAGRSGEALLAI---VGTVDRTADQVRAIATAAEQQSAASEQITRAVDRISTIS 641
              +  LA ++ +AL+ I   +GT+++ + Q+ A   AAEQQSA +E+I R+V  +  I+
Sbjct: 592 TEGTVVLARQAEQALVEINQSIGTIEQMSQQISA---AAEQQSAVTEEINRSVLSVRDIA 648

Query: 642 GHTADSMRHSAGAVSDLARLAQELDAII 669
             +A +   SA +  +LARL  +L +++
Sbjct: 649 DQSASATEQSAASTVELARLGSDLQSMV 676



 Score = 55.8 bits (133), Expect = 6e-12
 Identities = 87/362 (24%), Positives = 143/362 (39%), Gaps = 49/362 (13%)

Query: 195 AAGLVALLAGVI--LFIRRAIVDRVQRITDASTAIAGGDLNADLAVGGHDELARLAANLH 252
           +  LV LL G+     I R I   +     A+  IA GDL  D +    DEL  L   + 
Sbjct: 334 SVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIADGDLTHDSSTTRQDELGLLQNTMQ 393

Query: 253 GMVGGLKKELGFSKGILNGMTLPFLVADTDGRVSYCNTA--LLHMLGLD--GTPEEQTGK 308
            M   L+  +G   GI NG+T     A+    VS   +A   L    +D   T   +   
Sbjct: 394 HMTVSLRGLIG---GIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMAS 450

Query: 309 TVGDLMFGEPQRVTVTDRVLRERAVHTGQRVTLDSRK----GGQVHVVVDSAPLLDLDGN 364
           TV ++     +  +   +   ERA H    V   +R+     G+V  + ++   L  D  
Sbjct: 451 TVQEVA-RNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSG 509

Query: 365 LIGAFSVYTDVTEMQRQQARIEEQHARIARAAEAARQVSARVSSASGELSEQVEEASSGA 424
            IG+     DV +   +Q  +   +A I    EAAR              EQ    +  A
Sbjct: 510 KIGSV---IDVIKAVAEQTNLLALNAAI----EAARA------------GEQGRGFAVVA 550

Query: 425 DEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHE----------QARQGSVVVE 474
           DE R LA  + ++  ++ A +  +    G+A+ L   + +          QA Q  V + 
Sbjct: 551 DEVRSLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEIN 610

Query: 475 EAVACINRVAEQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLALNAA---IEAAR 531
           +++  I ++++Q          +    E + R +  + DIADQ+      +A   +E AR
Sbjct: 611 QSIGTIEQMSQQISAAAEQQSAV---TEEINRSVLSVRDIADQSASATEQSAASTVELAR 667

Query: 532 AG 533
            G
Sbjct: 668 LG 669