Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (501), Expect = 1e-54
 Identities = 112/293 (38%), Positives = 172/293 (58%)

Query: 377 EMQRQQARIEEQHARIARAAEAARQVSARVSSASGELSEQVEEASSGADEQRGLAVESAS 436
           E+ + QA I+     +       R    +++SA+ ELS   E+ S+G + Q+    + A+
Sbjct: 341 ELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVAT 400

Query: 437 AMEQMNASVMEVASNAGSAADLAGTAHEQARQGSVVVEEAVACINRVAEQARVLEHDMGE 496
           AM +M A+V EVA NA  A++ A  A  QAR G  VV EA+A I R+A         MG 
Sbjct: 401 AMHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGA 460

Query: 497 LGTQAEGVGRIIGVIEDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQA 556
           L  +++ +G ++ VI+ +A+QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA++T ++
Sbjct: 461 LKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKS 520

Query: 557 TREVVGFVEAIRTGVARSRSATDEAVRLVAQSTGLAGRSGEALLAIVGTVDRTADQVRAI 616
           T E+   +  +++G  ++ +  D +  L   S  L  R+G +L  I  TV       + I
Sbjct: 521 TEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQI 580

Query: 617 ATAAEQQSAASEQITRAVDRISTISGHTADSMRHSAGAVSDLARLAQELDAII 669
           A AAE+QSA +E+I R++  +  +S  T+ +   +A +  +LARL   L  ++
Sbjct: 581 AAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLV 633



 Score = 53.9 bits (128), Expect = 2e-11
 Identities = 81/365 (22%), Positives = 148/365 (40%), Gaps = 49/365 (13%)

Query: 193 ISAAGLVALLAGVIL--FIRRAIVDRVQRITDASTAIAGGDLNADLAVGGHDELARLAAN 250
           I AA  +A++ G++    I R I   +Q   +    +A GDL+ +L V   DEL +L A 
Sbjct: 289 IIAATALAMVLGILAAWVITRQITTPLQETLEVVERVASGDLSRNLNVDRKDELGKLQAT 348

Query: 251 LHGMVGGLKKELGFSKGILNGMTLPFLVADTDGRVSYCNTALLHMLGLD----GTPEEQT 306
           +  M   L++ +G   GI +G+T     A+    V+   +A ++   ++     T   + 
Sbjct: 349 IQRMTVSLRELVG---GIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEM 405

Query: 307 GKTVGDLMFGEPQRVTVTDRVLRERAVHTGQRVTLDS-----RKGGQVHVVVDSAPLLDL 361
             TV ++     +       V  +R    G+RV  ++     R    V    ++   L  
Sbjct: 406 TATVQEVARNAEEASEAA--VAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQ 463

Query: 362 DGNLIGAFSVYTDVTEMQRQQARIEEQHARI--ARAAEAARQVSARVSSASGELSEQVEE 419
           + + IG+     DV +   +Q  +   +A I  ARA EA R  +                
Sbjct: 464 ESDKIGS---VLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAV--------------- 505

Query: 420 ASSGADEQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHEQARQGSVVVEEA--- 476
               ADE R LA  +  + E++ A +  + S    A  +  ++ E +     +   A   
Sbjct: 506 ---VADEVRSLAQRTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGS 562

Query: 477 VACINRVAEQARVLEHDMG----ELGTQAEGVGRIIGVIEDIADQTNLLALNAA---IEA 529
           +A I +     + +   +     E    AE + R I  + D+++QT+  +   A   +E 
Sbjct: 563 LANITKTVSSIQAMNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVEL 622

Query: 530 ARAGD 534
           AR G+
Sbjct: 623 ARLGN 627