Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  182 bits (463), Expect = 3e-50
 Identities = 99/262 (37%), Positives = 169/262 (64%)

Query: 401 QVSARVSSASGELSEQVEEASSGADEQRGLAVESASAMEQMNASVMEVASNAGSAADLAG 460
           + ++ +  ++ EL+E   +A+    +Q+    ++A+AM +M A+V EVA ++ SAA+ A 
Sbjct: 268 EAASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESAR 327

Query: 461 TAHEQARQGSVVVEEAVACINRVAEQARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNL 520
            A E A +G+ +V+++++ ++ +A Q +     +GEL T+++ +GR++ VI+ IA+QTNL
Sbjct: 328 NADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNL 387

Query: 521 LALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATREVVGFVEAIRTGVARSRSATDE 580
           LALNAAIEAARAG+ GRGFAVVADEVR LA++T ++TRE+   +E+++ GV  + ++ ++
Sbjct: 388 LALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQ 447

Query: 581 AVRLVAQSTGLAGRSGEALLAIVGTVDRTADQVRAIATAAEQQSAASEQITRAVDRISTI 640
            +  V  +      +G AL  IV +VD        IATAA++QS  +E I +++  IS I
Sbjct: 448 GIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDI 507

Query: 641 SGHTADSMRHSAGAVSDLARLA 662
           +  +  +    + AV  LA+LA
Sbjct: 508 AQESTQAANDLSEAVHQLAQLA 529



 Score = 37.7 bits (86), Expect = 1e-06
 Identities = 66/337 (19%), Positives = 120/337 (35%), Gaps = 49/337 (14%)

Query: 207 LFIRRAIVDRVQRITDASTAIAG-GDLNADLAVGGHDELARLAANLHGMVGGLKKELGFS 265
           +++ R ++  V  I      I    D+     V   DEL  +A +L+G+V  LK   G  
Sbjct: 207 VWVNRGVMTPVTEIRQKLRQIREKSDMTVSFTVFRDDELGHIAKDLNGVVNHLK---GIL 263

Query: 266 KGILNGMTLPFLVADTDGRVSYCNTALLHMLGLDGTPEEQTGKTVGDLMFGEPQRVTVTD 325
           K I    +    + D+   ++         +    +  EQT   + + M      V  + 
Sbjct: 264 KNIAEAAS---TLGDSADELNEFTRQANDRMFKQQSETEQTATAMNE-MTAAVAEVAQSS 319

Query: 326 RVLRERAVHTGQRV---------------TLDSRKGGQVHVVVDSAPLLDLDGNLIGAFS 370
               E A +  +                  L S+  G   V+ + A      G ++    
Sbjct: 320 NSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIK 379

Query: 371 VYTDVTEMQRQQARIE-----EQHARIARAAEAARQVSARVSSASGELSEQVEEASSGAD 425
              + T +    A IE     EQ    A  A+  R ++ R S ++ E+   +E    G  
Sbjct: 380 SIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGV- 438

Query: 426 EQRGLAVESASAMEQMNASVMEVASNAGSAADLAGTAHEQARQGSVVVEEAVACINRVAE 485
                     SA+  M   + +V  NA  + + AG+A          +++ VA ++ + +
Sbjct: 439 ---------KSAVNSMEQGIAQV-DNANESTNAAGSA----------LQDIVASVDSITQ 478

Query: 486 QARVLEHDMGELGTQAEGVGRIIGVIEDIADQTNLLA 522
               +     E    AE + + I  I DIA ++   A
Sbjct: 479 LNTHIATAADEQSCVAESINQSIIAISDIAQESTQAA 515



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 11/125 (8%)

Query: 544 DEVRKLAEKTMQATREVVGFVEAIRTGVARSRSATDEAVRLVAQSTGLAGRSGEALLAIV 603
           D V  L +  +      V  ++AI    A   SA +    L+     +A R  + +    
Sbjct: 45  DRVVPLEDLKLIGDDYAVSVIDAINKANAGGFSAEEARNGLIEAKKNIASRWDKYM---- 100

Query: 604 GTVDRTADQVRAIATAAEQQSAASEQITRAVDRISTISGHTADSMRHSAGAVSDLARLAQ 663
            + + TAD+ +  +   +  + A++QI   +D++S  SG             +D+  L Q
Sbjct: 101 -STELTADEQKLASQTQQLFAPANQQIQLLIDKLSGKSGSVTGQFS------ADIIPLYQ 153

Query: 664 ELDAI 668
            +D I
Sbjct: 154 VIDPI 158